| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1816 |
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| Symbol | |
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| ID | 4022298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2033941 |
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| End bp | 2035194 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637962010 |
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| Product | D-amino-acid dehydrogenase |
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| Protein accession | YP_568953 |
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| Protein GI | 91976294 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.230934 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGAAA ACGAAACTGA TGTTCTGGTG CTCGGCGCCG GAATCGTGGG TGTCGGCGCC
GCGCTGCACT TGCAGCGGCG TGGCCGCGAT GTGGTGCTGG TCGATCGCAA CAGCGCGGCC
GGCGACGAGA CCAGCTATGG CAATGCCGGG CTGATCGAAG TCGCCTCCGT ATTCCCCTAT
ATGTTTCCGC GCGATCTCGG GCATCTGCTG CGCTACGCCT TTAACGGCTC TGCAGATGTG
CGCTATCAGC TGTCCGGCCT TCCGGAGTTT CTGCCCTGGC TGCTGCGCTA TTTTCAGGCG
TCGTCACCGG AGGGCGCGGC ACGCACCGCG CGCGCGTCGC TGCCTTTGAT CCGGCAGAGC
CTCGCCGAGC ACGAAGCCTT GATCGCCGAG GCCGGCGTGC CGGAGCTGTT GCGCAAGACC
GGTTGGATCA AGCTGTTTCG CGCCGAGCGA TCCTTCGACA AAAGCGTCGC CGATCTCGCA
CGAGCGAAGC AGTTCGGCGT CACCGCCGAC GTGCTCGACC ACACCGCGAT CGCGACGCGG
GAGCCGAGTC TGATGGGCAA GTTCGCCGGC GCCATCCATT GGCTGGAGCC GGGCTTCATT
CCCGATCCTG GCGCGCTGGT GAAAGCCTAT GCTGCGCTGT TGTTGCGCAA GGGCGGACGG
TTCGCGCGCG GCGATGCGCG CACGCTGCAG CAGCAGGGCG GCGGCTGGCG GATCACGACC
GACGACGGCC CGATCACCGC GCGCGAGGTG GTGGTTACGC TCGGGCCTTG GTCGGACCTC
GTGTTCAAGC CGCTCGGCTA TCGCATTCCG CTCGGCGTCA AGCGCGGCTA TCACCAGCAC
TTCACCGCGC GCGGCAATGC GGTGCTGCAG CATCCGATCC TCGATGCCGA CCGCGGTTAT
CTGCTGGCCC CGATGACCCG CGGCATCCGG CTCACCACCG GCGCGGAGTT CGCCCGCCGC
GACGCGCCGC CTTCGCCGGC TCAGGTCGAT CAGGCCCGAT CGATGGCGCG CGATCTGTTT
CCGCTCGGCG ACGCGATCGA GCAGCAGCCA TGGCTGGGTG CGCGGCCGTG CCTGCCGGAT
ATGCTGCCGG TGATCGGCCG GGCCCCGCGC CACCCCGGGC TGTGGTTCGA TTTCGGCCAT
CAGCATCATG GCTTGACGCT TGGTCCGGTC ACCGGCCGGC TGTTGGCCGA GATGATGACG
GGCGAGGAGC CGTTTGCGGA TCCGACGCCG TTCGCCGTCG AGCGGTTCGG CTGA
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| Protein sequence | MKENETDVLV LGAGIVGVGA ALHLQRRGRD VVLVDRNSAA GDETSYGNAG LIEVASVFPY
MFPRDLGHLL RYAFNGSADV RYQLSGLPEF LPWLLRYFQA SSPEGAARTA RASLPLIRQS
LAEHEALIAE AGVPELLRKT GWIKLFRAER SFDKSVADLA RAKQFGVTAD VLDHTAIATR
EPSLMGKFAG AIHWLEPGFI PDPGALVKAY AALLLRKGGR FARGDARTLQ QQGGGWRITT
DDGPITAREV VVTLGPWSDL VFKPLGYRIP LGVKRGYHQH FTARGNAVLQ HPILDADRGY
LLAPMTRGIR LTTGAEFARR DAPPSPAQVD QARSMARDLF PLGDAIEQQP WLGARPCLPD
MLPVIGRAPR HPGLWFDFGH QHHGLTLGPV TGRLLAEMMT GEEPFADPTP FAVERFG
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