| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1813 |
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| Symbol | |
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| ID | 4022295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 2030186 |
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| End bp | 2031145 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637962007 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_568950 |
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| Protein GI | 91976291 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.673068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGA TGCTCGCGCC CGAGGGCCAC GATCCCGCAA CGCCGCGCGG CCACTGGCTC
GCCCGTGTCG CCGACAGCGA TGTGTTCTAC GCGTTCCGCC GCTCGCCGCT GGCGATCGGC
GCCGCCATCG TCACGTTGCT GTTCTTCGCG GTCGCGATCT TCGCGCCGCT GCTCGCGGTG
CAGAACCCGT TCGATCCGGC GCAGCTCGAA CTGATGAACT CGCGGATCGC GCCGCTGTGG
ACCGCCGATG GTCAGGCGCC GTTCCTGCTC GGCACCGACG AACAGGGCCG CGACGTGCTG
TCGGCGATCC TGTACGGCCT GCGGATCTCG CTTCTGGTCG GCGTGCTCGG CGTCGGGCTC
GCCGCGGCGA TCGGCATCGT CCTCGGCCTG ATCGCCGGCT ATTTCGGCGG CTTCGCCGAC
ACCGTCATCA TGCGCATCGC CGACGTCCAG CTCACCTTCC CGGCGATCCT GATCGCGCTG
TTGATCGACG GCGTGGTGAA GTCGGCGCTC GGCAACAAGC TCGACGAACG CACGATGTTG
GCGGTGCTGG TGGTCTCGAT CGGGCTGAGC TTCTGGGTGC AATACGCCCG CACGGTGCGC
AGCTCGGTGA TGGTGGAGCG GACCAAGGAC TATGTCGCGG CGGCGCAGCT GATCGGCCTG
CCGGCAGCGA CGATCATGCG CCGGCACGTG CTGCCGAACA CGATGGGCCC GGTGCTGGTG
ATCGCCACCA TCAATCTCGC GCTCGCCGTC CTGACCGAGG CGACGCTGTC GTTCCTCGGC
TCCGGAATGC CGGAAACCAT GCCCTCGCTG GGCACGCTGA TCCGGATCGG CAACAACTAT
CTGTTCTCCG GCGAATGGTG GGTGATCGCC TTCCCCGGCA TCGCGCTCGC GACGTTGATC
TTGTCGATCA ATCTGCTCGG CGACTGGCTG CGCGATGCGC TCAACCCGAA ACTGCGATGA
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| Protein sequence | MTEMLAPEGH DPATPRGHWL ARVADSDVFY AFRRSPLAIG AAIVTLLFFA VAIFAPLLAV
QNPFDPAQLE LMNSRIAPLW TADGQAPFLL GTDEQGRDVL SAILYGLRIS LLVGVLGVGL
AAAIGIVLGL IAGYFGGFAD TVIMRIADVQ LTFPAILIAL LIDGVVKSAL GNKLDERTML
AVLVVSIGLS FWVQYARTVR SSVMVERTKD YVAAAQLIGL PAATIMRRHV LPNTMGPVLV
IATINLALAV LTEATLSFLG SGMPETMPSL GTLIRIGNNY LFSGEWWVIA FPGIALATLI
LSINLLGDWL RDALNPKLR
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