Gene RPD_1795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1795 
Symbol 
ID4022277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2008445 
End bp2009767 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content65% 
IMG OID637961989 
Productadenylyl cyclase class-3/4/guanylyl cyclase 
Protein accessionYP_568932 
Protein GI91976273 
COG category[T] Signal transduction mechanisms 
COG ID[COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000135307 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.424488 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATGC CGTGGCGACG GACGTCGCCG ACCTCGTCGC AGCCCTCGAC GCTGTCGGAT 
GATCTTCGCA GCGCGCTGAC GCGCGAGATT CTGCGGACCG AATTGCTGCG GGCGACGGTG
CTCCTGATCA CCGTCTCGCT GCTGATGACG AGCATGCTCG TCTCGTATTG GATGTTCCCC
TGGGCGATCG AGAAGATCTG GCGCGGACAG TTTTCGCCGG CGCCACTGCT GGTGTCCTAC
GTGCCTTTGC TGCTGTTCGA ATTGAGCGTC ATCGCGACGC TACGCCGGCG GCTGGCGCTT
GGGCGCGACT TGCCGAAAAT CGGGCGCTAC ATCGGGGTGT TGGTCGAAAC CAGCCTGCCG
ACGGTCGGCC TCTATATGCA CATGAACATC ATGGGGTCTG CGCAAGCGCT CGCCTTCGCC
GTTCCGTTCG CCTATTTCAT CTTCATCATC CTGTCGACGC TGTGGCTCGA TTTCCGGCTG
TCGCTGTTCA CCGGCTTCGT CGCCGCTGCC GAACTGCTCG CGATGGCGAT GTTGTATCAC
CCGCCGGGAT TTCCCGACGA CCCGCCGCCT GATCTCGCCT TCCATTTGAT CCGCAGCGTT
GTGATCCTGA CTTGTGGCGT CCTCGCCGGT GCGGTGGGGG CGCAGCTACG CCGGCAGTTC
GAATCGTCGA TCGCAGCCGC CGGTGCGCGC GATCACATCA CCAATTTGTT CGGCCAGCAT
GTGTCGCCGC AAGTGGTCGA CCAACTGCTC GCAGCGGGGA CCCAGGTCAC CGGCGAGACC
CGCAAGGTCG TGGTGATGTT CGTCGATTTC CGCAACTTCA CCCGCGACGC GCGGGTGCGG
TTGCCGGGCG AGGTGGTGGT GCGGCTCGAC GAGGCCTTCG CGGTGCTGAT CGACATTCTC
GAGCGCCACG GCGGCATCGT GAACAAGTTT CTGGGTGACG GATTTCTCGC GCTGTTCGGC
GCGCCGATCG AGGATGCGCG CGCGGCTCCG CGCGCCGTGG CGGCGGCGCG CGAAATGCTG
GCCGCGATGG ACGAGCACAA TGCGGGACAG GATTGGCCGC TGCGGATGGG CATCGGCATT
CATATCGGCG ACGTGGTGGT CGGTACCGTC GGTTCGCCGC GGCGCAAGGA ATACACGGTG
ATCGGCGACA CCGTGAATTT CGCCTCGCGG CTCGAATCCC TCAACAAGGA ATTCGGCACG
CAGCTCCTGA TTTCGTCGGC GATCCGCGAC GAACTCGGCG CGGGGGCGAG CGACGCCGAG
TTGCTCGGCA GCGTGCCGAT ACGCGGCTAC GCCGAGCCGA TGGCGGTGTG GCGGCTGGGT
TGA
 
Protein sequence
MQMPWRRTSP TSSQPSTLSD DLRSALTREI LRTELLRATV LLITVSLLMT SMLVSYWMFP 
WAIEKIWRGQ FSPAPLLVSY VPLLLFELSV IATLRRRLAL GRDLPKIGRY IGVLVETSLP
TVGLYMHMNI MGSAQALAFA VPFAYFIFII LSTLWLDFRL SLFTGFVAAA ELLAMAMLYH
PPGFPDDPPP DLAFHLIRSV VILTCGVLAG AVGAQLRRQF ESSIAAAGAR DHITNLFGQH
VSPQVVDQLL AAGTQVTGET RKVVVMFVDF RNFTRDARVR LPGEVVVRLD EAFAVLIDIL
ERHGGIVNKF LGDGFLALFG APIEDARAAP RAVAAAREML AAMDEHNAGQ DWPLRMGIGI
HIGDVVVGTV GSPRRKEYTV IGDTVNFASR LESLNKEFGT QLLISSAIRD ELGAGASDAE
LLGSVPIRGY AEPMAVWRLG