Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1795 |
Symbol | |
ID | 4022277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 2008445 |
End bp | 2009767 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637961989 |
Product | adenylyl cyclase class-3/4/guanylyl cyclase |
Protein accession | YP_568932 |
Protein GI | 91976273 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000135307 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.424488 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAATGC CGTGGCGACG GACGTCGCCG ACCTCGTCGC AGCCCTCGAC GCTGTCGGAT GATCTTCGCA GCGCGCTGAC GCGCGAGATT CTGCGGACCG AATTGCTGCG GGCGACGGTG CTCCTGATCA CCGTCTCGCT GCTGATGACG AGCATGCTCG TCTCGTATTG GATGTTCCCC TGGGCGATCG AGAAGATCTG GCGCGGACAG TTTTCGCCGG CGCCACTGCT GGTGTCCTAC GTGCCTTTGC TGCTGTTCGA ATTGAGCGTC ATCGCGACGC TACGCCGGCG GCTGGCGCTT GGGCGCGACT TGCCGAAAAT CGGGCGCTAC ATCGGGGTGT TGGTCGAAAC CAGCCTGCCG ACGGTCGGCC TCTATATGCA CATGAACATC ATGGGGTCTG CGCAAGCGCT CGCCTTCGCC GTTCCGTTCG CCTATTTCAT CTTCATCATC CTGTCGACGC TGTGGCTCGA TTTCCGGCTG TCGCTGTTCA CCGGCTTCGT CGCCGCTGCC GAACTGCTCG CGATGGCGAT GTTGTATCAC CCGCCGGGAT TTCCCGACGA CCCGCCGCCT GATCTCGCCT TCCATTTGAT CCGCAGCGTT GTGATCCTGA CTTGTGGCGT CCTCGCCGGT GCGGTGGGGG CGCAGCTACG CCGGCAGTTC GAATCGTCGA TCGCAGCCGC CGGTGCGCGC GATCACATCA CCAATTTGTT CGGCCAGCAT GTGTCGCCGC AAGTGGTCGA CCAACTGCTC GCAGCGGGGA CCCAGGTCAC CGGCGAGACC CGCAAGGTCG TGGTGATGTT CGTCGATTTC CGCAACTTCA CCCGCGACGC GCGGGTGCGG TTGCCGGGCG AGGTGGTGGT GCGGCTCGAC GAGGCCTTCG CGGTGCTGAT CGACATTCTC GAGCGCCACG GCGGCATCGT GAACAAGTTT CTGGGTGACG GATTTCTCGC GCTGTTCGGC GCGCCGATCG AGGATGCGCG CGCGGCTCCG CGCGCCGTGG CGGCGGCGCG CGAAATGCTG GCCGCGATGG ACGAGCACAA TGCGGGACAG GATTGGCCGC TGCGGATGGG CATCGGCATT CATATCGGCG ACGTGGTGGT CGGTACCGTC GGTTCGCCGC GGCGCAAGGA ATACACGGTG ATCGGCGACA CCGTGAATTT CGCCTCGCGG CTCGAATCCC TCAACAAGGA ATTCGGCACG CAGCTCCTGA TTTCGTCGGC GATCCGCGAC GAACTCGGCG CGGGGGCGAG CGACGCCGAG TTGCTCGGCA GCGTGCCGAT ACGCGGCTAC GCCGAGCCGA TGGCGGTGTG GCGGCTGGGT TGA
|
Protein sequence | MQMPWRRTSP TSSQPSTLSD DLRSALTREI LRTELLRATV LLITVSLLMT SMLVSYWMFP WAIEKIWRGQ FSPAPLLVSY VPLLLFELSV IATLRRRLAL GRDLPKIGRY IGVLVETSLP TVGLYMHMNI MGSAQALAFA VPFAYFIFII LSTLWLDFRL SLFTGFVAAA ELLAMAMLYH PPGFPDDPPP DLAFHLIRSV VILTCGVLAG AVGAQLRRQF ESSIAAAGAR DHITNLFGQH VSPQVVDQLL AAGTQVTGET RKVVVMFVDF RNFTRDARVR LPGEVVVRLD EAFAVLIDIL ERHGGIVNKF LGDGFLALFG APIEDARAAP RAVAAAREML AAMDEHNAGQ DWPLRMGIGI HIGDVVVGTV GSPRRKEYTV IGDTVNFASR LESLNKEFGT QLLISSAIRD ELGAGASDAE LLGSVPIRGY AEPMAVWRLG
|
| |