Gene RPD_1784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1784 
Symbol 
ID4022266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1998809 
End bp1999717 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content66% 
IMG OID637961978 
ProductATPase 
Protein accessionYP_568921 
Protein GI91976262 
COG category[R] General function prediction only 
COG ID[COG0714] MoxR-like ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.582319 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.377483 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCA CGCCGCCTCC GGCTTCGGTC GACGCGACGC TCGAGCTGTT GACCAGCCGT 
GGTTATCTCG CCGAGCGCGC GCTGGCGACC GTGGTGTTTC TGTCGCTGCG AATGAGGCGG
CCGCTGTTTC TCGAAGGCGA GGCCGGGGTC GGCAAGACCG AAATCGCCAA GGTGCTGTCG
GCCGCGCTGG GCCGCCGCCT GATCCGGCTG CAATGCTATG AGGGCCTCGA CGTCGCCTCC
GCGGTGTACG AGTGGAACAG CGCGGCGCAG ATGATCGCGA TCCGCCTCGC CGAAGCCGCC
GGCGACACCG ATCGCGCCCA GCTTTCGAGC GATATCTTTT CCGAGCAATA TCTCATCAAG
CGACCGCTGC TGCAAGCGCT GGAGCCGGAT CTGGCCGGCG CCCCGGTGCT GCTGATCGAC
GAACTCGACC GCGCCGACGA GGCGTTCGAG GCGTATCTGC TGGAAGTGCT GTCCGACTAT
CAGGTGACGA TCCCGGAGTT CGGCACCATC CAGGCGCCGC AGCCGCCGAT CGTGATCGTG
ACCTCGAACC GCACCCGCGA AATCCATGAC GCGCTGAAGC GGCGCTGCCT GTATCACTGG
GTCGACTATC CGTCCGCCAG CCGGGAACTC GCGATCGTCA AATCGCGCGT GCCGGGGATC
TCGGCGAAGC TGTCGCAGCA GGTGGTGAAC TTCGTCCAGG CGCTGCGGGC GCAGGATTTC
TACAAATCGC CGGGCGTCGC CGAGACGCTG GACTGGGCGA CCGCTTTGAC CGAACTCGAC
GCCCGCGCGC TGACCGCCGA TATCGTCGGC GACACGCTCG GCGCGCTGCT GAAGTACCAG
GACGACATCG TGCGAATGCA GGGCGACACG CTGCAGAAGG TGCTGAAGGA AGCGACCAGC
GAGACGTAG
 
Protein sequence
MSVTPPPASV DATLELLTSR GYLAERALAT VVFLSLRMRR PLFLEGEAGV GKTEIAKVLS 
AALGRRLIRL QCYEGLDVAS AVYEWNSAAQ MIAIRLAEAA GDTDRAQLSS DIFSEQYLIK
RPLLQALEPD LAGAPVLLID ELDRADEAFE AYLLEVLSDY QVTIPEFGTI QAPQPPIVIV
TSNRTREIHD ALKRRCLYHW VDYPSASREL AIVKSRVPGI SAKLSQQVVN FVQALRAQDF
YKSPGVAETL DWATALTELD ARALTADIVG DTLGALLKYQ DDIVRMQGDT LQKVLKEATS
ET