| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1750 |
|---|
| Symbol | |
|---|
| ID | 4022232 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 1965581 |
|---|
| End bp | 1966102 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637961944 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_568887 |
|---|
| Protein GI | 91976228 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
|---|
| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAAAA GAATAGACCA AAGGATGAGG CCCTTGCAGC AGACCGCCGA CACGGCACGC
CCCCATCGTC CCGACCTTCA GATTGCAACC GAAGGCGAAT TCGCCGGCTG GCGCACCTGG
ACTCGCGACA CTTTCGAGTC CAATTCGGGC CCGTTCTGGC ACCGCATCGA GGACGACGGC
CAGGTGCGCT GCGCCTTCCG GGTCGAGAAG AAGCACCTCA ACGGCATGAA CGCCGTGCAC
GGCGGCTGCT TCATGACGTT CGCCGATTAC TGCCTGTTCG CCATCGCCTC GCGCGAATTG
CAGGGGCCGG GCGTGACGGT GGCGTTCGGC GCCGAATTCC TCGACGCGGC CTATGAGGGC
GAACTGATCG AATCCACCGG CGAAGTGACT CGCGCCGGCG GCTCGCTGAT CTTCGTCCGC
GGCATCCTGA AATGCGCCGC GCGGCCGCTG TTCACGTTTT CAGGGACGAT CAAGCGCGTG
AAGCGGAAGG TGGCGCCGAC GGAGATCGCG GACAGCCATT AG
|
|---|
| Protein sequence | MEKRIDQRMR PLQQTADTAR PHRPDLQIAT EGEFAGWRTW TRDTFESNSG PFWHRIEDDG
QVRCAFRVEK KHLNGMNAVH GGCFMTFADY CLFAIASREL QGPGVTVAFG AEFLDAAYEG
ELIESTGEVT RAGGSLIFVR GILKCAARPL FTFSGTIKRV KRKVAPTEIA DSH
|
|---|
| |