Gene RPD_1727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1727 
Symbol 
ID4022207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1938459 
End bp1938857 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content62% 
IMG OID637961921 
Productresponse regulator receiver 
Protein accessionYP_568864 
Protein GI91976205 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0248964 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGATAATT CGATCGTCAT TCTGGTCGTC GAAGACGATC CGATGATCCA GAGCATCGTG 
CTGGAAGCCC TCGAAGAAGG TGGTTTCGAA GCTGTGATCG CATCCTCGGG CGAGGAAGCG
GTTGATCTGC TCACGGACGG CGATCGCTTT CGCGGACTGG TGACCGATGT CAATCTCGGC
CGCGACCGGA TGCCAGGCTG GGAGGTCGGA CGCCGCGTTC GCGAAATCGA TCCCGCCTTC
CCGGTCGTTT ACATGACCGG CGACAGCGCT GCGGAGTGGG CCGCCCGCGG CGTTCCCAAC
AGTATCCTGC TGACCAAGCC TTTCGCGCCA TCGCAGGTGG TTGCCGCCGT CACGCAGCTC
CTCAACACCC CCAATGCGGG CGCGTCTCCG AACACATGA
 
Protein sequence
MDNSIVILVV EDDPMIQSIV LEALEEGGFE AVIASSGEEA VDLLTDGDRF RGLVTDVNLG 
RDRMPGWEVG RRVREIDPAF PVVYMTGDSA AEWAARGVPN SILLTKPFAP SQVVAAVTQL
LNTPNAGASP NT