| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1723 |
|---|
| Symbol | |
|---|
| ID | 4022203 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 1935866 |
|---|
| End bp | 1936552 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637961917 |
|---|
| Product | cyclic nucleotide-binding |
|---|
| Protein accession | YP_568860 |
|---|
| Protein GI | 91976201 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.637067 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATTCAT ACGAGGCGGC GTTCGATTCC AAGGCGTTTC TTGGTAGCGC TGGGCCGGGC
CGGGCCGTCC AGCAGTTCCG CAAGAATCAG GCGATATTTG CGCAGGGCGA CGATGCCGAA
AGCGTGCTGT TTCTGCAGCG CGGTCGGGCC AAGCTCGTGG TGATGTCCGA GCAGGGCAAG
GAGGGCGTGG TCGCGATCCT GCAGCCCGGC CAGTTTTTCG GCGAGAGCGG ATTGATCGGC
CGCCGGCGCT TGTCGACGGC GGTGGCGCTC GAGGACTGCG TCGTCACCAC GCTTGCAAAC
AGCATGCTGA TCTCGACGCT TCAGCGCGAG CCCGGCATGT GCGAGTTCTT CCTGACGCAT
CTCTTGAAGC GCAATTGCAG GGTCGAGGAA GACCTGATCG ATCAGTTGTT GAACTCGAGC
GAGAAGCGGC TGGCGCGGCT GTTACTTCTG CTCGCTGATT TCAGCGCCGG CGATACGGCA
AAGTCGCTTC CGGTCGATAT CAGCCAGGAG ACGCTGGCCG AAATGATCGG CACCACGCGC
TCGCGCGTCA GTCACTTCAT GAACAAGTTT CGCAAACTCG GCTTCATCAA CTACAATGGC
CATATCGAAG TATATCCGTC GCTGCGAAGC GCGATCGCGC CGGACAAGGC GCGGTTGCCG
GACGGCGAGG CGCGTAGCTC CGGTTAG
|
|---|
| Protein sequence | MNSYEAAFDS KAFLGSAGPG RAVQQFRKNQ AIFAQGDDAE SVLFLQRGRA KLVVMSEQGK
EGVVAILQPG QFFGESGLIG RRRLSTAVAL EDCVVTTLAN SMLISTLQRE PGMCEFFLTH
LLKRNCRVEE DLIDQLLNSS EKRLARLLLL LADFSAGDTA KSLPVDISQE TLAEMIGTTR
SRVSHFMNKF RKLGFINYNG HIEVYPSLRS AIAPDKARLP DGEARSSG
|
|---|
| |