| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1719 |
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| Symbol | |
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| ID | 4022199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1932558 |
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| End bp | 1934105 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637961913 |
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| Product | peptidase C14, caspase catalytic subunit p20 |
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| Protein accession | YP_568856 |
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| Protein GI | 91976197 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4249] Uncharacterized protein containing caspase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.648302 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAATTGC CACGGGCCGG TGGTGAACCC GCTTGTGCTG GCGACCGACC AACAGCGGGA
ATTGATCAAG GAAAGGACGG GCCGATGTTG CGTGCGATGC TGTGGAACGC GGCGCTGGCG
GCGACGATGC TGCTCGGGAC GCAAGCGGCG CTGGCCGAAA GCCGCGTTGC CCTGGTGGTC
GGGCAGTCGG CCTATCGCGC GGTGCCGGCG CTGCCCAATC CGGTCAACGA CGCCAAGGCG
ATCGAGAAGC TGCTCGGCGA CGCCGGCTTC GAGGTCACCG CCGCCAACGA TCTCAGCCAG
ACCGAACTGC GGCAGATGGT CGGCGATTTC GCCGCCAAGG TTGCGGCCAA GGGGCCGGAC
ACCGTGGCGC TGATGTTCTA TGCCGGCCAC GGCATCCAGG TCGACGGCGA GAACTATCTG
GTGCCGGTGG ACGTTGATCC GAAACGCGAG GCCGACATTC CGCTGCAGGC GGTTCGGCTC
AACGACGTGC TCAACACCCT GACCTCGGTG CCGACGCGGA CCCGGATCAT CATGCTCGAT
GCCTGCCGCA ACAATCCGTT CCCCGAGATC AAGAAGATCA CCGGCCAGGG GCTGGCGCTG
GTCGATGCCA AGACCGGAGC GCCCGGCACC TTCCTGTCGT TCTCGACCTC GCCGGGCGCC
GAAGCCGAAG ACGGCGGCGG CGCCAACAGC CCTTACACGG CGGCGCTGCT GAAGGCCGGT
CGCGAGAGCG GTCTGCAGAT CGAGGACACC TTCAAGCGGG TGCGGCTGGC GGTCAATCAG
GCCACCTCCG GCCGGCAGAC GCCGTGGGAA AGCTCGTCGC TGGTGGATGA TTTCCGCTTC
TTCGGCTCGG CCGAGGACGG CATCAAGCCG GAGAAGAAAC GCACCGTCGA GGAATGGAAG
GCCTTCCTGA AGGGTAAGCC GATCGAGCAG GCCAACGAGC TTATCGTCTC CGACGGTTCC
GGCGACGCCT ACGAGGCGTT CGTGTCACTG TATGCCGAGC CGCCGCTCGG CACCGAGGCG
AAGCGCTGGC TCGACCGCTT TCGCCAGATG CAGGCCTGGA ACCGGGCGGT CCTCGCCAAC
AGCGGGCCGG CGTATCGGTC CTTCCTTGAC CAGTACCCCG ACAGCGACCT GACCCCGACC
GCGAAAAAGC TCGAAGAGCG GCAGCGCAAC AAGCCGGTGC CCGCGGTGGC GATCCCGGCC
GCCACGCAGG CCAGCCTGAC GCCGCCGGCG ATTCAGGCCG CGGCAACCTG CCCATGCAGC
ACGCCGCCGG CGATCGACAA GAAGATCGAC AAGACCAAGC CGAAGCGGGC CGAGCGCGCC
GAGCCGCCGA AGCGCACGGC CGTGAAGCCG CCGCGCGAGC GGGTGTATTA CGAAGACGAC
GTGGAGGATG TGGTCGTGGT GCGGCGTCCG CCGCCGGTCT ACTACGATCC GCCGCGCGGC
CCGAGCATTT CGATCGGCGG CGGCATTCGG GGTGGGGGCT ACGGTGGCGG CTACGGCGGT
GGACCGAGCG GCGGCAATGG CGGGCGGATC GGCGGCGGCC GCTACTGA
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| Protein sequence | MQLPRAGGEP ACAGDRPTAG IDQGKDGPML RAMLWNAALA ATMLLGTQAA LAESRVALVV
GQSAYRAVPA LPNPVNDAKA IEKLLGDAGF EVTAANDLSQ TELRQMVGDF AAKVAAKGPD
TVALMFYAGH GIQVDGENYL VPVDVDPKRE ADIPLQAVRL NDVLNTLTSV PTRTRIIMLD
ACRNNPFPEI KKITGQGLAL VDAKTGAPGT FLSFSTSPGA EAEDGGGANS PYTAALLKAG
RESGLQIEDT FKRVRLAVNQ ATSGRQTPWE SSSLVDDFRF FGSAEDGIKP EKKRTVEEWK
AFLKGKPIEQ ANELIVSDGS GDAYEAFVSL YAEPPLGTEA KRWLDRFRQM QAWNRAVLAN
SGPAYRSFLD QYPDSDLTPT AKKLEERQRN KPVPAVAIPA ATQASLTPPA IQAAATCPCS
TPPAIDKKID KTKPKRAERA EPPKRTAVKP PRERVYYEDD VEDVVVVRRP PPVYYDPPRG
PSISIGGGIR GGGYGGGYGG GPSGGNGGRI GGGRY
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