Gene RPD_1710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1710 
Symbol 
ID4022190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1924573 
End bp1925580 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content67% 
IMG OID637961904 
Producthypothetical protein 
Protein accessionYP_568847 
Protein GI91976188 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCCC CTTTCAGATC GCTTCTGACC ACCCTCGTCT GCGCCGCGCT GTGCGGCAAC 
CCGGCCGCCG CGGCCGCCGA CCGGATCAAG CCGGAGCCGA CGCAATGGAC GAGCAGCGGC
GATCTCGGAA AGAGCGCCGA CGCGCGGCAG AATCTCAGCG GCGCCGCCTG CGCGCCGACC
TCACCGCCGC TGCGATCCTG CCTGATCGTC AACGACGAGA AGAAATATGC GCAGGCCTTC
AGCATCGCGG GAACGGCGCT GACGCCGGGC ACGGTGATTC GACTGGTCGA CAAGGGGGAT
GACGGCGATC CGGACGCGGA AGCGACCGCC TATGACGACA GCCATTTCTA TGTGACCGGC
TCGCACGGCC GCAAACGCCA CGACTGGAAA GCCCACAATC CATCGAGCTA CGCGCTGTTT
CGCTTTCCGC TCGACAAGGA CGGCCAGCCG ATCTTCATCG GCGAAGAAAA GGTGCAGGGT
CTGGCGCACA GCGCGCGGCT CGGCGAGGCG CTGAAATCGA TCAATCCGGT CGCCGCTTAT
TTCGACCAGC CGCTCGACGA AGGCGGGATC AATATCGAGG GCCTCGCGCT GCGCGGTACG
CGGATGTATC TCGGCCTGCG CGGCCCCTCG CGCGACGGCG AGGCGTTCAT CGTGTCGATC
GACAAGGCCG CGCCGTTCAC CCCGGATGCG CCGCTCGACG CCAAGCTGCA TTCCCTGAAG
CTCGGCCGCC ACGCCGGCAT CCGTGATCTC GCGGCGGTGA AGGACGGGCT CCTCGTCCTG
TCCGGCCCGG TCAACGAGCA GACCGACGCC GCGCCGGCGG TGTTCCTGTG GCGCGCCGAC
GATCAGCTTG CAAAGCTCGG CGAACTCGAG CTTCCCGACG TCAAGGGATC GGCGAAAGCC
GAAACCCTGC TGGTGCTGCA GGACGCCGAC GGCGCGCCGT TGCGCGTGCT GGTGATGTTC
GACGGCCCCG ACAACGGCCG GCCGACGGAA TACGTCCTGC GGCGCTGA
 
Protein sequence
MTPPFRSLLT TLVCAALCGN PAAAAADRIK PEPTQWTSSG DLGKSADARQ NLSGAACAPT 
SPPLRSCLIV NDEKKYAQAF SIAGTALTPG TVIRLVDKGD DGDPDAEATA YDDSHFYVTG
SHGRKRHDWK AHNPSSYALF RFPLDKDGQP IFIGEEKVQG LAHSARLGEA LKSINPVAAY
FDQPLDEGGI NIEGLALRGT RMYLGLRGPS RDGEAFIVSI DKAAPFTPDA PLDAKLHSLK
LGRHAGIRDL AAVKDGLLVL SGPVNEQTDA APAVFLWRAD DQLAKLGELE LPDVKGSAKA
ETLLVLQDAD GAPLRVLVMF DGPDNGRPTE YVLRR