Gene RPD_1675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1675 
Symbol 
ID4022155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1892614 
End bp1893099 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content66% 
IMG OID637961869 
Producthypothetical protein 
Protein accessionYP_568812 
Protein GI91976153 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.026823 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGA TGCAACCCCA ACAGGCCGCC GCTCCCCAGC CGGTGACGTC GCCGGCCGAC 
GCACGCAAGC TCGCCAACAG TCTGATCGAG GTGATGGACG CGCTGCTGGC GGTGATCGAG
CGCGAGACCG AGCTGGTTCG CGCCGGCAAG ATCCCCGAAG CGATGAAGCT CGAGCGCGAC
AAGAACGATT GGACCCGGCG CTACATCGTC GCGATCACGC TGGTGAAAGC CAGCCAGCCC
TATATGGCGC AGGCGACGCC CGACCTGCTC GGCGGTCTGC ATCGTCATCA CGAAGTGTTC
CGCGCGATGC TGCAGGTCAA TCTCACCGTG CTCGCCACCG CGCACGCGGT GTCCGAGGGC
ATCGTACGCG GCGTCAACGC CGAGGTGCAG CGCCGCAACA TTCCGCAGAC CTACACCGCT
TATGGCAAGC GCGCTGCGCC CGGCCCGAAA AACCTCACGC CGATCGCGGT CAGTCGCTCG
CTGTAG
 
Protein sequence
MTQMQPQQAA APQPVTSPAD ARKLANSLIE VMDALLAVIE RETELVRAGK IPEAMKLERD 
KNDWTRRYIV AITLVKASQP YMAQATPDLL GGLHRHHEVF RAMLQVNLTV LATAHAVSEG
IVRGVNAEVQ RRNIPQTYTA YGKRAAPGPK NLTPIAVSRS L