13 homologs were found in PanDaTox collection
for query gene RPD_1675 on replicon NC_007958
Organism: Rhodopseudomonas palustris BisB5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007958  RPD_1675  hypothetical protein  100 
 
 
161 aa  327  3e-89  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.026823 
 
 
-
 
NC_007778  RPB_3796  hypothetical protein  82.32 
 
 
164 aa  259  1e-68  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.199128  normal 
 
 
-
 
NC_011004  Rpal_4434  hypothetical protein  77.3 
 
 
163 aa  249  1e-65  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_1109  hypothetical protein  67.31 
 
 
163 aa  214  5e-55  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.199159  normal  0.198527 
 
 
-
 
NC_007925  RPC_1495  hypothetical protein  70.42 
 
 
163 aa  209  2e-53  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.126254 
 
 
-
 
NC_007964  Nham_1342  hypothetical protein  67.57 
 
 
163 aa  201  2e-51  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5522  hypothetical protein  65.44 
 
 
161 aa  189  2e-47  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_4704  hypothetical protein  35.48 
 
 
157 aa  82  0.000000000000003  Methylobacterium nodulans ORS 2060  Bacteria  decreased coverage  0.00344811  n/a   
 
 
-
 
NC_010725  Mpop_3240  hypothetical protein  33.76 
 
 
159 aa  68.6  0.00000000003  Methylobacterium populi BJ001  Bacteria  normal  0.277022  normal 
 
 
-
 
NC_010511  M446_4188  hypothetical protein  35.03 
 
 
157 aa  67.4  0.00000000009  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3043  hypothetical protein  32.21 
 
 
159 aa  64.3  0.0000000007  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.56 
 
 
-
 
NC_011757  Mchl_3267  hypothetical protein  32.21 
 
 
159 aa  63.9  0.0000000008  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_5548  hypothetical protein  29.56 
 
 
157 aa  59.3  0.00000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.863043 
 
 
-
 
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