Gene RPD_1651 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1651 
Symbol 
ID4022131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1860031 
End bp1860687 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content67% 
IMG OID637961846 
Producthypothetical protein 
Protein accessionYP_568789 
Protein GI91976130 
COG category[S] Function unknown 
COG ID[COG4731] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.150043 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACAC ATCGACCGAT CCGCTTGTTT GCAATGGCGG CCGCCGCCGT CGTTTCATTC 
CTGATGTCTG CGCCGGCCCC GGTCGCCGCG GCAGAACCGA CCGCCGTCGG GCTCTGGCAA
CGCACCGACA ACGGCAAGCC CACTGGCAAG CCGGTAGTCT GGGTGCTGAT GCTCGACCGC
GGCAACAACA TGTACGAAGG CGTCGTCGCC AAGTCGTTTG CGCAGCCCGG CCAGCCCAAC
CTGACGGTGT GCGAGGAGTG CGAGGACGAC CGCAAAGGTC AGCCGATCCT CGGCATTTCT
CTGATCCGCG ACATGAAGCG GAAGGGCCGG GTCTATGAGG GCGGCAACAT CCTCGATCCA
CGCAATGGCG ACGTCTGGAA GGCGATGCTG ACGGTCAGCC CCGACGGCCA GGATCTGACG
CTGCGCGGCT ATTTGCTGAC CCCGGCGCTC GGCCAGGACG AGACCTGGCA ACGGCTGCCC
GATACGGCGA TCGCCCAGAT CGATCCAGTG ATCGTCGCCA AGTTCATGCC GGAACAGGCC
GCGGCGCTCG CCGCCAAGCC GGGCGCCACC GCCGGCAAGC CGAAGGCTAC TACCCCGGCC
CCGGCGCCTG CCCCGATGCA GAAGGGCGGC ATGATGGCGC CCGCGCCCGC GAAGTAA
 
Protein sequence
MNTHRPIRLF AMAAAAVVSF LMSAPAPVAA AEPTAVGLWQ RTDNGKPTGK PVVWVLMLDR 
GNNMYEGVVA KSFAQPGQPN LTVCEECEDD RKGQPILGIS LIRDMKRKGR VYEGGNILDP
RNGDVWKAML TVSPDGQDLT LRGYLLTPAL GQDETWQRLP DTAIAQIDPV IVAKFMPEQA
AALAAKPGAT AGKPKATTPA PAPAPMQKGG MMAPAPAK