| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1650 |
|---|
| Symbol | |
|---|
| ID | 4022130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 1858656 |
|---|
| End bp | 1859963 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637961845 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_568788 |
|---|
| Protein GI | 91976129 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.161502 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTTCCG TCCTCACCCG ATCGTCGCGT GCCCGGCAGA GGCTGGAGCA GACCCGCGAC
TGGCTGATAC GCGTGCGGGC CGGCGAGAAG CTGTTCATCC TGTCGATGTG CCTGATCTAT
GCGATGCACA GCATCTGGCT GGCGCGCACC GTGATGTGGT TCCTGGTGCT CCCGGTGATG
CTGATCGCGA CGGCGCCGTA CCGGAACCTG CTGCCGATCG TGAAATCAAG CGTGTTCATC
GCCTCGGTCG CGTTCCTTTT GCTGATCATC GGCACCTCGG CGCTCGGCGG CGAGACGCCG
GGGCAGATGA TGGTGAGCAA CCTGCGCTAC GCCGCGGCTG TGCTGGCGTT CGTCGTGGTG
GTCGCGCATC TGGTGCGCAG CGACGGCGAT TTCCTGCAAC TCCTGTTCCT GGTGCTGGCG
CCGGTGGCGG CGCTGGCGGC GATTCGCGAT GTGGTGTCGT TCAGCGGGCT GTCGCTTGAG
ACGCTGCTCA CCGTCCGGTT GCAGGGCGTC AAGGGACTGA CCGTGTACTA CAACTCCAAC
GTCATCGGCA TGATGTTCGC GATGCCCTTG GTCGGCGCGG CGGCGGTGAT GGCGTCGCGG
ACGCTGAAGC GCTGGCAGTT CGCGATGCTG GCGGCCTCGG TGCTGATCCT GCTGCTCGCG
ATCGTGCTGA CCGGCAGCCG CGGCTCGCTG ATCGCGGCGA CCGTCGGCAT CGGTGTGTCG
ATCCTGTCGG CGAACTGGCG GCTGGCGGCG GCGATCGTGG CGCTGGTGGC AGTCGCCGCC
GCGGTCACGC TGCTGACGCC GCTGGCCGGC GAGTTGCTGC AACGGCGCGA CAGCCTGCGG
CTGACCCTGT GGCCGGTCTA TCTGGAGATG GCGATGCTGA AGCCGTGGCT CGGCTACGGG
CTCGCCTTCG ACACCCAGCG CACGCTGGCC GACGGCAGCG TGGTGATGAA CGGCCACAAC
ATCTTCCTGT GCGCGGCGGT GCGCGGCGGC GTGCTCAGCG TGATGGCGCT CGCGAGCATC
GTGCTGGCGT CCCTGATCAG CGCGCTGCGG GCGTGGCTGC GCTGCCGCGA GATCCTGGCA
TTGGCGCTGC TCGCGACCTG CCTCACCGCC ACCAGCGTCG ACTACGAAAT CATCCCGAGC
GATCTCGGGT ATCTGTATAT TCTGTTCTGG CTGCCGGCCG GGATCTGCCT CGGTGCGGCG
CTGACCACGG CCCAGCGTGG GCTCCCGGAC CGACGCGCAG TCGCGACTGG AACCCCGGCA
GCCGGATCTG CCGCCTCGTC ACACAATTGC CAGCCGGCTG GTGATTAG
|
|---|
| Protein sequence | MISVLTRSSR ARQRLEQTRD WLIRVRAGEK LFILSMCLIY AMHSIWLART VMWFLVLPVM
LIATAPYRNL LPIVKSSVFI ASVAFLLLII GTSALGGETP GQMMVSNLRY AAAVLAFVVV
VAHLVRSDGD FLQLLFLVLA PVAALAAIRD VVSFSGLSLE TLLTVRLQGV KGLTVYYNSN
VIGMMFAMPL VGAAAVMASR TLKRWQFAML AASVLILLLA IVLTGSRGSL IAATVGIGVS
ILSANWRLAA AIVALVAVAA AVTLLTPLAG ELLQRRDSLR LTLWPVYLEM AMLKPWLGYG
LAFDTQRTLA DGSVVMNGHN IFLCAAVRGG VLSVMALASI VLASLISALR AWLRCREILA
LALLATCLTA TSVDYEIIPS DLGYLYILFW LPAGICLGAA LTTAQRGLPD RRAVATGTPA
AGSAASSHNC QPAGD
|
|---|
| |