| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1632 |
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| Symbol | |
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| ID | 4022112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1829736 |
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| End bp | 1830722 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637961827 |
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| Product | pyridoxal-5'-phosphate-dependent enzyme, beta subunit |
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| Protein accession | YP_568770 |
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| Protein GI | 91976111 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.451091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.69001 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGATC AGCTCTCGTT CCCGATCACC GCTGCGGATA TCGACGCGGC GGCCGAGGTG
CTCGCGCCCT ATGCGGTGCG CACGCCGCTG TTGACGTCGC CGGCGCTGGA CGCCGCCACC
GGCGCACGCG TGTATCTGAA GCCGGAGATG TTGCAGCGGA CCGGCTCGTT CAAGTTTCGC
GGCGCCTTCA ACAAGCTGTC GTCGATCCCG CAGCAGGCGC GGGGCGGCGG CGTCGTGGCG
TTTTCCTCGG GCAACCATGC CCAGGGCGTC GCCGCGGCGG CGCAGATTCT CGAGATGCGC
GCCACCATCG TGATGCCGGC CGACGCGCCG GCGTCGAAGC GCGAGCGCAC CAAGGGCTAC
GGCGCCGAGG TGGTGCTGTA CGATCGCGAA CGCGAGGATC GTGAAGCGAT CGCGCGGGAC
ATCGCCGACA GCCGCGGCGC GACGCTGGTG CCGCCTTATG ATGATCCCAA GGTGATCGCT
GGGCAGGGAA CGGTCGGCCG CGAGATCGCG GCAGACCTCG CCGCGCTCGG CGTCACGCCC
GATATCGTGG TCGCTCCGGC CTCCGGTGGC GGGCTCGTTG CCGGCACTGC GGTCGCGGTA
ACGACGCGCT TTCCCGAGGC CGCGGTGATG TCGGCGGAGC CGGAAGCGTT CGACGATCAC
GCCCGCTCGA TCGCCGCCGG TCGCCGCGAG CCGCATCGCG CTCAGGGCCG CACCATCTGC
GACGCGCTGA TGGCTTCGAT CCCCGGCGAA CTCACCTTCG CGATCAATCA GCAGCTTCTG
GCGCGCGGCG TCACGGCATC CGACGCAGAG GTCGCGACCG CAGTGGCCTT CGCATTCCGT
GAGTTGAAGC TGGTGGTCGA GCCCGGCGGC GCGGTGGCGC TGGCGGCATT GCTGGCGGGG
CATATCGATG CGCGCGGTAA GACCATCGCG ATCGTGTTGT CAGGCGGCAA TGTCGATGCA
GACTTGTTCG CGAGGCTGAT TGCTTAG
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| Protein sequence | MMDQLSFPIT AADIDAAAEV LAPYAVRTPL LTSPALDAAT GARVYLKPEM LQRTGSFKFR
GAFNKLSSIP QQARGGGVVA FSSGNHAQGV AAAAQILEMR ATIVMPADAP ASKRERTKGY
GAEVVLYDRE REDREAIARD IADSRGATLV PPYDDPKVIA GQGTVGREIA ADLAALGVTP
DIVVAPASGG GLVAGTAVAV TTRFPEAAVM SAEPEAFDDH ARSIAAGRRE PHRAQGRTIC
DALMASIPGE LTFAINQQLL ARGVTASDAE VATAVAFAFR ELKLVVEPGG AVALAALLAG
HIDARGKTIA IVLSGGNVDA DLFARLIA
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