| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1608 |
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| Symbol | |
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| ID | 4022088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1801326 |
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| End bp | 1803128 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637961803 |
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| Product | ABC transporter related |
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| Protein accession | YP_568746 |
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| Protein GI | 91976087 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.645383 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACG CCCCACGTAA GATAACGGAC GATCCCTACG GCGCGGCGCA GCTCGTGCGT
CGTCTGGTGA TGGAACAGGC CTCGGTCTAT TGGCGTCGCT ATCTGCTGGC CTTCAGCCTG
ATGGCGGTGG CCGCGGCTGC GACGGCGCTG TCGGCCTATC TGCTCGGACA GGTAATCAAC
CAGGCCTATG TCGACCGCAA TCTGCAGGGC ATCATGATCC TGTCGGTCGT GAGTCTCGCG
ATCTTCACGC TGAAGGGGGC AGCGACCTAC GGCCAGTCAG TGATCCTGAC CCAGATCAGG
AACGCGATCC TCGCCAATAA TCAGCGGCGG CTGTTCGCCA AGCTGATGCA CGAGAGCCTC
GGCTTCTTCT CGCAGCGGCA CTCCTCGGAG TTTCTCGCGC GCCTGACATC CGGCGCGAAC
TCGGTCACCG AGGTCCTCAA TTTGCTGATC AACGCGGTCG GCCGCGATCT GCTGTCGCTG
ATCGCTCTGG TCATCGTGAT GGTCTCGCAG GACCCGTTCA TGGCGCTGTT CGGCCTCTTG
ATCGCGCCGC CGGCGGTGTT CGTGCTGCGC AAGCTGGTGC GGCGCGTGAA GGGACTCGCC
CACACCCAGT TCACCGGTAA CGCCGAAATT CTCGAGACCA TGCAGGAGTC GCTGCAGGGC
ATCCGGACCG TGAAGGCGTT CTCGCTCGAA CAGACCATGC GAGAACGGAT CAACGCCAGC
ATCAGCGCGG TCGAGCGGAA CGCCAACAAG ATGGCGCGGG TCTCGAATCG GTCCAGCCCG
CTGATGGAGA CGCTCGGCGG CTTCGCAGTG GCGGCCTCGC TGATGTATGG CGGCTACCGC
GTGGTCGCGA CCGGCGCGAC GCCGGGGCAG TTCTTTTCCT TCCTCACCGC CTTCCTGCTC
GCCTATGAGC CAGCGAAGCG GCTGGCGCGG CTCAACATAG AGCTCAACAG CGCCCTGGTC
GGCGCACGGA TGTTGCTCGA GATCGTCGAC AGCCCGCAGA GCGAGCCCGA CGACAGCGAC
AAGCCGCCTC TCGCGCTGAC CGTGGCGCGC GTCGAGTTCG ACAACGTCTG CTTCGCCTAT
CGCCCCGACG AGCCGGTGCT CAATCACATG AGTTTCACGG CCGAGCCCGG CAAGATGACC
GCGCTGGTCG GCCCCTCCGG CGGCGGCAAA TCGACCGTGC TGGCGCTGTT GCTGCGGCTG
TACGAAGCCG GCTCCGGCGA CATCCGCATC GACGGCCAAT CGATCGCGGC GGTGTCGCGG
CGGTCGCTGC GGCAGCAGAC CGCCTATGTC GGCCAGGACG TCTATTTGTT CCGCGACTGC
ATCCGCGCCA ACATCGCTTT CGGCAAGATC GGCGCCAGCG AGGACGAGAT CGTCGCCGCC
GCCAAGGCTG CCCATGCGCA TGATTTCATC ATGAGCTTCC CGCTCGGCTA CGACACGCCG
GTCGGCGAAC ACGGCGCACA ACTGTCCGGC GGCCAGCGCC AGCGGATCGC GGTGGCGCGC
GCGCTGCTCC GCGATGCGCC GATCGTGCTG CTCGACGAAG CGACTGCGGC GCTCGACTCC
GAATCGGAAA AGCTTGTGCA GGAAGCGATC GAACGTTTGT GCCTCAACCG CACCACGATC
GTGATCGCGC ACCGGTTGCA CACCATCATG CACGCCGACG CCATTCTGGT GGTCGAAGCC
GGCGAGATCG TCGAGCAGGG CCGGCACGAC GATCTGTTGC GACGCAGCGG CCGCTACGCC
TCGTTCTTCC GTCTGCAGCA GCGCCATGCC GCGCCGCTGG CGCCCGCAGA CACCGCGATC
TAG
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| Protein sequence | MTDAPRKITD DPYGAAQLVR RLVMEQASVY WRRYLLAFSL MAVAAAATAL SAYLLGQVIN
QAYVDRNLQG IMILSVVSLA IFTLKGAATY GQSVILTQIR NAILANNQRR LFAKLMHESL
GFFSQRHSSE FLARLTSGAN SVTEVLNLLI NAVGRDLLSL IALVIVMVSQ DPFMALFGLL
IAPPAVFVLR KLVRRVKGLA HTQFTGNAEI LETMQESLQG IRTVKAFSLE QTMRERINAS
ISAVERNANK MARVSNRSSP LMETLGGFAV AASLMYGGYR VVATGATPGQ FFSFLTAFLL
AYEPAKRLAR LNIELNSALV GARMLLEIVD SPQSEPDDSD KPPLALTVAR VEFDNVCFAY
RPDEPVLNHM SFTAEPGKMT ALVGPSGGGK STVLALLLRL YEAGSGDIRI DGQSIAAVSR
RSLRQQTAYV GQDVYLFRDC IRANIAFGKI GASEDEIVAA AKAAHAHDFI MSFPLGYDTP
VGEHGAQLSG GQRQRIAVAR ALLRDAPIVL LDEATAALDS ESEKLVQEAI ERLCLNRTTI
VIAHRLHTIM HADAILVVEA GEIVEQGRHD DLLRRSGRYA SFFRLQQRHA APLAPADTAI
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