Gene RPD_1594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1594 
Symbol 
ID4022074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1788719 
End bp1789861 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content63% 
IMG OID637961789 
Producthypothetical protein 
Protein accessionYP_568732 
Protein GI91976073 
COG category[S] Function unknown 
COG ID[COG5397] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTAT CTGCGGCGCT CGATATCTCC TACCAGACCC TCTACTCGGA GCTGGTCCAG 
CGCAGCTTGG ACGACAGCTT CACGTCCGAA TTCTCAACCG ACGGACGCTT CGTCGCCGTG
ACGGTGAAGA CCCGGAAATA CTGGTACTTC GACACGCCCA AATCTGAAGG CGGTGCACAG
AACCGACGAT ATGTCGGTCC CGTTGACGAT CCGGAAATCA CCAAGCGCGT CGAGGCATTC
AAGGACCTCA AGGCCGATCT GAAAGGTCGC CGGCGCCTCG TCGCGACGCT CACGCGCCAA
GCCTATTTGC CACGACCGCT CTTGAAGAGC GGCCAAGTAG TCGAGGAACT GGCGAAAGCC
GGCTTCTTCC GTCTCCGAGG CGTCCTCGTG GGGACGGTTG CATACCAATG CTATCCCGGC
GTGCTTGGCC GTCGGCTTGA CGCCACCGCA ATGCAGACCG GCGATGCCGA CTTCGCCCAA
TTCCACGAAA TCTCGGTGGC GGTCGGCGAC AGCCTTCCGC CGATCCTGGA CGTCCTTCAC
CGCGTCGACG AAACTTTCCG CGAAATCCCC AGCCAGGTGG ACGGGCGTGT TTCCACGCAG
TTCGTCTCGC GCGACAAGTT CAAGGTCGAA TTCCTGACGC CACACCGCGG TCCTGACGAT
ATCGCGGGCA AGCCGGTGCA AATGCCGGCC TTGGGCGGCG CTGCGGCATT CCCGCTCCGC
TTTCTCGATT TCCTGATCCG TCATCCGGTT CGGGCCGTGC TGATGCACGG CGCCGGCGTG
CCGGTTCTGG TTCCGTCCCC CGACCGCTAT GCCGTGCACA AGCTCATCGT TGGATCGCGC
CGAAAGGAAG ACCGCGACAC CGCGAGCAAG GCAGCCAAAG ATCGCCTTCA GGCCAAATCG
ATCATGGAGG CGATGATCGC CAACCGGCAG CAAGACGATC TGGCCGCCGC CTACATGGAG
GCCTGGGACC GCGGGGATCA TTGGGTCGCC GCGATCCGCA TCAGCCTGGC GACATACGAC
GATCAGTTCC GCGGCTTGCT CGGGTGCGAA CTCGGGAAGG GCATCAAGAA CAACGGCGGC
GAGCCAAGCG ACTACGGCCT CGACGACGAA CCGAAGGGAA CGGCCACGCC GGGGCCGCGG
TAG
 
Protein sequence
MAVSAALDIS YQTLYSELVQ RSLDDSFTSE FSTDGRFVAV TVKTRKYWYF DTPKSEGGAQ 
NRRYVGPVDD PEITKRVEAF KDLKADLKGR RRLVATLTRQ AYLPRPLLKS GQVVEELAKA
GFFRLRGVLV GTVAYQCYPG VLGRRLDATA MQTGDADFAQ FHEISVAVGD SLPPILDVLH
RVDETFREIP SQVDGRVSTQ FVSRDKFKVE FLTPHRGPDD IAGKPVQMPA LGGAAAFPLR
FLDFLIRHPV RAVLMHGAGV PVLVPSPDRY AVHKLIVGSR RKEDRDTASK AAKDRLQAKS
IMEAMIANRQ QDDLAAAYME AWDRGDHWVA AIRISLATYD DQFRGLLGCE LGKGIKNNGG
EPSDYGLDDE PKGTATPGPR