Gene RPD_1554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1554 
Symbol 
ID4022034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1732792 
End bp1733343 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content62% 
IMG OID637961749 
Productcytochrome B561 
Protein accessionYP_568692 
Protein GI91976033 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACCA CGGCGAACCC GCAGGAGCGC TACACGCGCA TGGCCATCCT TCTGCATTGG 
GGGATGACGG CGATCATCTT CGGCTTGATC GGCGTTGGTT TCTACATGAG CAACTTGCCG
CCTTCGCCGC AAAAATATGC GCTCTATGAT CTGCACAAGT CGTTCGGCGT AGTGGTGGTG
TTGCTGCTCG CAGTGCGACT GGTGTGGCGT GCTGCGCACA TCCCGCCGGA GCTTCCGGCG
GCCTATTCGC CGTTGCTGCG GAACGCCAGT CACCTCGGGC ACCTGCTGCT CTATGTCCTG
ATGTTCGCCG TTCCGGTCTC CGGTTGGGTG ATGAGCGCAG CCGGTGGCCG TCCGGCCTCG
CTGTTCGGAT TGTCGATTCC TCCGCCGGTC GAAAAGAGCG AGCATCTCGC CGGCCTTTGG
GGCGACGTAC ACTTCACGCT CGCTGCAGCC TTTGTGCTGC TCATCATCGG CCACACGCTG
TTCGCGCTGA AGCATCACTT CATCGACAAG GATGGGCTGT TGAGGCGGAT GTGGGGTGGC
CTGCTCCCGT AA
 
Protein sequence
METTANPQER YTRMAILLHW GMTAIIFGLI GVGFYMSNLP PSPQKYALYD LHKSFGVVVV 
LLLAVRLVWR AAHIPPELPA AYSPLLRNAS HLGHLLLYVL MFAVPVSGWV MSAAGGRPAS
LFGLSIPPPV EKSEHLAGLW GDVHFTLAAA FVLLIIGHTL FALKHHFIDK DGLLRRMWGG
LLP