| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1544 |
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| Symbol | |
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| ID | 4022024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1720511 |
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| End bp | 1722154 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637961739 |
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| Product | cyclohexanecarboxylate-CoA ligase |
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| Protein accession | YP_568682 |
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| Protein GI | 91976023 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | [TIGR03208] cyclohexanecarboxylate-CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTCG ATGCCGTATT GCTGCCGGCG CGTCGGGCCG AGAGCGTCGC CCGCGGGTTC
TGGCACGACC GCACCATCAA CGACGATCTC GATGCCTGCG TCGCCGCCTG CCCGGACAAG
ACCGCCCTGA CGGCGGTGCG TCTCGACCGC GGTGAGCCGC GCCGTTTCAG CTATCGCGAA
CTCGCAACGC TCACTGATCG CGTCGCGGTG GGGCTTGCGC GGCTCGGGGT CGGACGCAAC
GATGTGGTGG CGATGCAACT GCCGAACTGG TGGCAGTTCA GCATTCTCTA CCTCGCCTGT
TCGCGCATCG GAGCGGTGCT CAATCCGCTG ATGCCGATCT TCCGCGAGCG GGAATTGTCG
TTCATGCTGA AGCACGGCGA GGCCAAGGTG CTCGTCGTTC CGAAGACCTT CCGCAATTTT
GATCACGAAG CGATGGCGCG CGGGCTGCAG CCGTCTTTGC CGGCGCTGCA GCGGATCGTG
GTGGTCGACG GCGGCGGGGC AGATGATTTC GACGCGCTAC TGACCATCCC GGAATGGGAG
CAGCAGCCGG ACGCGCAGAC GATCCTGAGC AGCAACCGGC CGGGTCCGGA CGACATCACG
CAACTGATCT ACACCTCGGG GACCACGGGC GAGCCCAAGG GCGTGATGCA CAGCGCCAAC
ACGCTGATGG CCAATATCAT TCCCTATGCC GAGCGGCTCC GGCTCGGCGC AGACGACGTC
ATCCTGATGG CCTCGCCGAT GGCGCATCAG ACCGGCTTCA TGTACGGGCT GATGCTGCCG
ATCATGCTGA AGGCGAGCGC CGTGCTCCAG GACGTCTGGG ATCCGGCCAA GGCGGCCGAG
CTGATCCGGG CGGAGCAAGT GAGCTTCACC ATGGCCTCCA CCCCGTTCCT CGCCGACCTC
ACCCGCGTCG TGAAGGAGAG CGCGAAGTCA GTCCCGAGCC TCAAGACCTT CCTCTGCGCC
GGCGCGCCGA TTCCGGGGCC GCTGGTCGAA CAGGCGCAGA TCGGCCTCGG CGCCAAGATC
GTCTCCGCCT GGGGGATGAC GGAGAACGGC GCCGTCACCC TGATCAAGCT CGACGATGAC
GACAAGCTGG CCTCGACCAC CGACGGCTGC GCGCTGCCGG GCGTCGAGGT GAGGGTGGTC
GACGGCGACG GCAACGCGCT GCTGGCCGGC GAAATCGGAC GGCTGGTGGT GCGATCGTGT
TCGAATTTCG GCGGCTATCT GAAGCGCCCG CAGTGGAACG GCACCGACGC TGACGGCTGG
TTCGACACCG GCGACCTCGC TTACATCACC GCCGGCGGCT ACATCCGGAT CAGCGGCCGC
AGCAAGGACG TGATCATTCG CGGCGGCGAG AACATCCCGG TCGTCGAAGT CGAAGCCCTG
CTCTACAAGC ATCCTGCTGT CGCGCAGGTC GCCATCGTCG CCTATCCCGA TGAGCGCCTC
GGCGAGCGCG CCTGCGCCGT GGTGGTTCCC AGGAGCGGCG GGGCGATCGA TTTCCCAGCG
ATGGTCGAGT TTCTGAAATC TCAGAAACTC GCGGTCCAGT ACATTCCTGA ACGGCTGATC
GTTCGTGAAG CCATGCCCGC GACGCCTTCC GGCAAGATTC AGAAATTCCG CCTGCGCGAG
ATGCTGCAGC AGAACGACCT TTAG
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| Protein sequence | MEFDAVLLPA RRAESVARGF WHDRTINDDL DACVAACPDK TALTAVRLDR GEPRRFSYRE
LATLTDRVAV GLARLGVGRN DVVAMQLPNW WQFSILYLAC SRIGAVLNPL MPIFRERELS
FMLKHGEAKV LVVPKTFRNF DHEAMARGLQ PSLPALQRIV VVDGGGADDF DALLTIPEWE
QQPDAQTILS SNRPGPDDIT QLIYTSGTTG EPKGVMHSAN TLMANIIPYA ERLRLGADDV
ILMASPMAHQ TGFMYGLMLP IMLKASAVLQ DVWDPAKAAE LIRAEQVSFT MASTPFLADL
TRVVKESAKS VPSLKTFLCA GAPIPGPLVE QAQIGLGAKI VSAWGMTENG AVTLIKLDDD
DKLASTTDGC ALPGVEVRVV DGDGNALLAG EIGRLVVRSC SNFGGYLKRP QWNGTDADGW
FDTGDLAYIT AGGYIRISGR SKDVIIRGGE NIPVVEVEAL LYKHPAVAQV AIVAYPDERL
GERACAVVVP RSGGAIDFPA MVEFLKSQKL AVQYIPERLI VREAMPATPS GKIQKFRLRE
MLQQNDL
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