Gene RPD_1540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1540 
Symbol 
ID4022020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1717001 
End bp1717528 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content59% 
IMG OID637961735 
Productregulatory protein, MarR 
Protein accessionYP_568678 
Protein GI91976019 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0757127 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGGA ATACAAAATC CGCATCTAAC ACCGCTACAA CGAAGACTGA GCTCGCTAAC 
CGATTGTTTT TTCGGCTCTA TCAATGCGCC AATATGTTGC ATAAAACCGG AACGCGCGCA
GTCGAAGCGG AGGGGCTGAC CACCCAGCAA TGGGCCGTGC TCGGCGCGCT GTCGCGCCCG
GTCGCGAAAG CGGGCATGAG CATCGGCGAT CTCGCCCGCT ATCTGATGGT GAGCCGGCAG
AATCTCGCCG GGCTGATCGG CCGCATGGAA CGCGACGGGC ATGTCGCGAT CGTGCCCGAT
GCGCGCGACC GTCGCTCACG CCTGGTAACG ATGACCGAAA CCGGCCGCCA TGTCTGGAAC
GATCTCGCCC AACCGAAAAT CCGCGCCTAT TACGATCAGG TACTTGCGGA TTTCTCGATC
AACGACACCA CGCATGCGCT GCACTACCTG CTCAAGATCC TCGACAATAT GAAGCGAATC
GACGACGGCG CATCCGACCT GGATGCGGAT GAGGAACCTC GGGACTGA
 
Protein sequence
MARNTKSASN TATTKTELAN RLFFRLYQCA NMLHKTGTRA VEAEGLTTQQ WAVLGALSRP 
VAKAGMSIGD LARYLMVSRQ NLAGLIGRME RDGHVAIVPD ARDRRSRLVT MTETGRHVWN
DLAQPKIRAY YDQVLADFSI NDTTHALHYL LKILDNMKRI DDGASDLDAD EEPRD