Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1540 |
Symbol | |
ID | 4022020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 1717001 |
End bp | 1717528 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637961735 |
Product | regulatory protein, MarR |
Protein accession | YP_568678 |
Protein GI | 91976019 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0757127 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGGA ATACAAAATC CGCATCTAAC ACCGCTACAA CGAAGACTGA GCTCGCTAAC CGATTGTTTT TTCGGCTCTA TCAATGCGCC AATATGTTGC ATAAAACCGG AACGCGCGCA GTCGAAGCGG AGGGGCTGAC CACCCAGCAA TGGGCCGTGC TCGGCGCGCT GTCGCGCCCG GTCGCGAAAG CGGGCATGAG CATCGGCGAT CTCGCCCGCT ATCTGATGGT GAGCCGGCAG AATCTCGCCG GGCTGATCGG CCGCATGGAA CGCGACGGGC ATGTCGCGAT CGTGCCCGAT GCGCGCGACC GTCGCTCACG CCTGGTAACG ATGACCGAAA CCGGCCGCCA TGTCTGGAAC GATCTCGCCC AACCGAAAAT CCGCGCCTAT TACGATCAGG TACTTGCGGA TTTCTCGATC AACGACACCA CGCATGCGCT GCACTACCTG CTCAAGATCC TCGACAATAT GAAGCGAATC GACGACGGCG CATCCGACCT GGATGCGGAT GAGGAACCTC GGGACTGA
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Protein sequence | MARNTKSASN TATTKTELAN RLFFRLYQCA NMLHKTGTRA VEAEGLTTQQ WAVLGALSRP VAKAGMSIGD LARYLMVSRQ NLAGLIGRME RDGHVAIVPD ARDRRSRLVT MTETGRHVWN DLAQPKIRAY YDQVLADFSI NDTTHALHYL LKILDNMKRI DDGASDLDAD EEPRD
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