| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1534 |
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| Symbol | |
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| ID | 4022014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1709363 |
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| End bp | 1710937 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637961729 |
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| Product | benzoate-CoA ligase family |
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| Protein accession | YP_568672 |
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| Protein GI | 91976013 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR02262] benzoate-CoA ligase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCTG CCGTAGTCGC GGCGCCGCCC GAGAGATTCA ACATTGCCCA GCATCTGTTG
TCGGCCAATC GAAGCCGGCC GGACAAGCTG GCCTTCGTCG ACGATTCCAG CGCCCTCACC
TTCGCCGAAC TCGACGACAA AGCGCGGCGG ATGGCGGCCA GCCTTCGCGC CCTCGGTGTG
AAGCGCGAAG AGCGCGTCTT CCTGCTGATG CTGGACGGCA CCGACTGGCC GGTCGCGTTT
CTCGGCGCGA TCTATGCCGG CGTCGTTCCG GTTGCGGCCA ACACGCTGCT CACCGCGGAC
GATTACGCCT ACATGCTGGA GCATTCGCGG GCGCAGTTGG TCCTGGTCAG CGGCGCGCTG
CGGGCGACGT TGAAGGCGGC GCTCACGAAG AGCGATCACG AAGTGCACAA GGTGATCGTG
TCTCATCCGA TCGCGCCGCT CGAACCCAAC GAGGTCGACT TCGAGGCCTT CGTCGGCGCG
CATGCGCCCC TGGAAAAGCC CGCGGCCACC CACGCCGACG ATCCGGCGTT CTGGCTGTAC
TCCTCCGGTT CGACCGGGCG TCCGAAAGGC GTCGTCCACA CCCAGGCAAA TCCATACTGG
AGCGCCGAGC TCTACGGCCG CAATACGCTG CAGCTGCGGG AGAGCGATGT CTGCTTCTCG
GCCGCCAAAC TGTTCTTCGC CTATGGTCTC GGCAACGCGC TGACGTTTCC TCTGACAGTG
GGCGCGACCA CGCTGCTGAT GCCGGAGAGG CCGACGCCGG ACGCCGTGTT CAAGCGCTGG
CTCGGCGGCG TCGCCGGCCT GAAGCCGACG GTGTTCTTCG GTGCGCCGAC CGGCTATGCG
GGCATGTTGG CGTCGCCGAA CCTGCCGGCG CGCGAGCAGC TTGCGCTGCG ACTGGCGTCG
TCCGCGGGCG AGGCGCTGCC GGCGGAGATC GGCCAACGCT TCCAGCGCCA TTTCGGCCTC
GACATCGTTG ACGGCATCGG CTCGACCGAG ATGCTGCACA TCTTCCTGTC GAACCGGCCC
GAGCGGGTGC GCTACGGCAC CACCGGTTGG CCGGTGCCGG GCTATCAGAT CGAACTGCGC
GGCGATTCCG GCGGACCGGT AGCCGATGGC GAGCCGGGCG ATCTGTACAT TCACGGACCG
TCGTCGGCGA CGATGTATTG GGGCAACCGC GCCAAGAGCC AGGAGACCTT CCAGGGCGGC
TGGACCAAGA GCGGCGACAA ATACATCCGC AATGAGGACG GCTCCTACAC CTACGCCGGC
CGGACCGACG ACATGCTCAA GGTCAGCGGC ATCTATGTCA GCCCGTTCGA GATCGAGGCG
ACGCTGGTGC AGCATCCGTC GGTGCTGGAA GCCGCGGTGG TCGGCATCGC CGACGAGCAC
GGCCTGACCA AGCCGAAGGC CTATGTGGTG CAGCGGCCGG GCGCGACCGT CTCCGAGGCC
GAACTGAAGA CCTTCATCAA GGATCGGCTG GCACCCTACA AATATCCGCG CAGCACGGTG
TTCGTCGACG AGCTGCCGAA GACCGCGACC GGCAAGATCC AGCGCTTCAA GCTGCGCGAA
GGCGTGTTGG GCTGA
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| Protein sequence | MNAAVVAAPP ERFNIAQHLL SANRSRPDKL AFVDDSSALT FAELDDKARR MAASLRALGV
KREERVFLLM LDGTDWPVAF LGAIYAGVVP VAANTLLTAD DYAYMLEHSR AQLVLVSGAL
RATLKAALTK SDHEVHKVIV SHPIAPLEPN EVDFEAFVGA HAPLEKPAAT HADDPAFWLY
SSGSTGRPKG VVHTQANPYW SAELYGRNTL QLRESDVCFS AAKLFFAYGL GNALTFPLTV
GATTLLMPER PTPDAVFKRW LGGVAGLKPT VFFGAPTGYA GMLASPNLPA REQLALRLAS
SAGEALPAEI GQRFQRHFGL DIVDGIGSTE MLHIFLSNRP ERVRYGTTGW PVPGYQIELR
GDSGGPVADG EPGDLYIHGP SSATMYWGNR AKSQETFQGG WTKSGDKYIR NEDGSYTYAG
RTDDMLKVSG IYVSPFEIEA TLVQHPSVLE AAVVGIADEH GLTKPKAYVV QRPGATVSEA
ELKTFIKDRL APYKYPRSTV FVDELPKTAT GKIQRFKLRE GVLG
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