| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1526 |
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| Symbol | |
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| ID | 4022006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1702098 |
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| End bp | 1703660 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637961721 |
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| Product | benzoate-CoA ligase family |
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| Protein accession | YP_568664 |
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| Protein GI | 91976005 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | [TIGR02262] benzoate-CoA ligase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.936301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCTTC GTGACTACAA TGCGGCGGTC GATTTCGTGG ATCGCAATGT CGCGGAAGGT
CGGGGCGACA AGATCGCCTT CATCGATCCG TTGCGGAGCC TGTCCTATGG CGAGCTACGC
GACGCGGCGG CGCGGGTCGG CCCGATGCTG GCGCGGCTCG GCGTCGAGCA GGAAGACCGC
ATCGCGCTGG TGTTGCAGGA CACCGTCGAT TTTCCGATCC TGTTCTGGGG AGCGATCCGC
GCCGGCGTCG TCCCGGTGCT GCTCAACACA AGGCTGACCA CCGATCAGTA CCGATATCTT
CTGGAGGATT CGCGCGCGAA GGCGGTGTTC GTCTCGACCG ATCTGCTGCC GCTGATCGAG
GAGGCCGCGA CCGACCTGTC GCATCTGCGC TCGATCATTG CGGTCGGCGA GGGAGCATCA
GCGGCGGCGC GGCTGGCCGA TCTGCTCGCC GCCGAAAACG AGGGCGGCGC GCCGGCCCGC
ACCTGCGCCG ACGACGTCGC CTATTGGCAA TATTCGTCCG GCACGACCGG AATGCCCAAG
GGGGTGATGC ACGTCCACTC CAGCCCGCGC GTCATGGCGA CGAGCGCCGG CCAGCGCCGC
ATCGGCTATC GCCAGGACGA TATCGTGTTC TCGGCGGCGA AGCTGTTCTT CGCCTACGGC
CTCGGCAACG CGATGTTCTG CTCGATGTGG GTCGGCGCAA CCTCGGTGCT CTACCCGGAG
CGGCCGACGG CGGAATCGGT GTTCGACGTG CTGCGGCTGC ACCAGCCGAC CCTGCTGTTC
GCGGTGCCGA CGCTGTATGC GGCGATCCTT GCCGATCAGC AGCGCAAGCA CGAGCGGCTG
CCGGAGCGGC TGCGGCTGTG CGTCTCCGCC GGCGAGCCGC TGCCGGCGCA GGTCGGATTG
AACTGGCGCA ATCGGTTCGG CCGCGACATC GTCAACGGCG TCGGCTCGAC CGAGATGGGC
CATCTGTTCC TGACCAATCT TCCGAGCGCG GTGGAATACG GCACGTCGGG TGTGCCCGTC
GATGGCTATC GGCTGAAGCT GGTGGACGAT CAGGGATGCG ACATCGCCGA CGGCGAAATC
GGTGAACTGT TAGTGAATGG CGGCTCCGCC GCTGCGGGCT ACTGGAATCA ACGTGACAAG
TCGCGGATGA CCTTCATCGG CGAATGGACG CGAACGGGCG ACAAATATCA CCGCCGCGCC
GACGGCGTGT ACACTTACCG CGGCCGCACC GACGATATGT TCAAGGTGAG CGGCATCTGG
GTTTCGCCGT TCGAAATCGA GGAAGCGCTG ATGGGGCACC CCAAGGTGGC CGAAGCGGCG
GTGATCCCGG CCGAAGATAT CGACGGACTG ATCAAGCCGA AGGCCTTTAT CGTGCTCGCC
TCGCAGGATG AAGACATCAA CGTATTGATC CAAGACCTCA AGGACCACGT CAAACGCGCG
ATCGGTCCGT GGAAGTATCC ACGCTGGATA CGTGTCGTGA ACGAGCTGCC GAAAACGTCA
AGCGGCAAGC TGCAACGCTA CATGTTGCGT GCGATGGTGC TGGACCAGGA CGGTTCAGTA
TGA
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| Protein sequence | MPLRDYNAAV DFVDRNVAEG RGDKIAFIDP LRSLSYGELR DAAARVGPML ARLGVEQEDR
IALVLQDTVD FPILFWGAIR AGVVPVLLNT RLTTDQYRYL LEDSRAKAVF VSTDLLPLIE
EAATDLSHLR SIIAVGEGAS AAARLADLLA AENEGGAPAR TCADDVAYWQ YSSGTTGMPK
GVMHVHSSPR VMATSAGQRR IGYRQDDIVF SAAKLFFAYG LGNAMFCSMW VGATSVLYPE
RPTAESVFDV LRLHQPTLLF AVPTLYAAIL ADQQRKHERL PERLRLCVSA GEPLPAQVGL
NWRNRFGRDI VNGVGSTEMG HLFLTNLPSA VEYGTSGVPV DGYRLKLVDD QGCDIADGEI
GELLVNGGSA AAGYWNQRDK SRMTFIGEWT RTGDKYHRRA DGVYTYRGRT DDMFKVSGIW
VSPFEIEEAL MGHPKVAEAA VIPAEDIDGL IKPKAFIVLA SQDEDINVLI QDLKDHVKRA
IGPWKYPRWI RVVNELPKTS SGKLQRYMLR AMVLDQDGSV
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