| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1502 |
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| Symbol | |
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| ID | 4021981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1673176 |
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| End bp | 1674783 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637961696 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_568640 |
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| Protein GI | 91975981 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGACA CGTATGACTT TGTCGTGGTC GGCGGAGGCT CCGGCGGTTG CGCCGTTGCC
GGCCGGCTAT CGGAAGATCC GGGCACATCG GTGGCGCTGC TCGAGGCCGG CGGCACCGCG
GACAATTGGG TGGTGAAGAC GCCCTACGCG CTGTCGCTGA TGGTGCCGGG CAAGCTCAAC
AACTGGCACT TCGAGACCGT GCCGCAAGCC GGCCTCAACG GCCGCATCGG CTATCAGCCG
CGCGGCAAGG GGCTGGGCGG ATCGTCGGCG ATCAACGCCA TGGTCTATAT CCGCGGCCAC
AAATGGGATT ACGACCATTG GGCCGAACTC GGCAATGCGG GCTGGTCCTA CGAAGACGTT
CTGCCTTACT TCAAGCGCTC GGAGAATAAT TCCGACTTCA ACGGCGCGTA TCACGGCCAG
AATGGTCCGC TGCACGTCAA CAAGCTCCGC ACCGACAATC CGGCGCACGA CATCTTCCTG
CAGGCGGCGC GCGAAGCGCA ATTCCGAATT CGCGACGACT TCAATGGCGA GGAGCAGGAA
GGCCTCGGCC TGTATCAGCT CACCCAGCAC AATGGCGAAC GCTGGAGCGC GGCGCGCGCT
TATGTGCATC CCTATATGAC GACGCGGCCC AATCTGCGCG TCGAAACGCA GGCGCAGGCG
ACACGCATCT TGTTCGAAGG CGGCCGCGCG GTCGGCGTCG AATATCGCCA GAACAACGAG
ACGCGGCAGG TCCGCGCCCG CCGCGAAGTG ATCGTCGCAT CCGGCGCATT CCAGACGCCG
CAACTGCTGT TGCTATCCGG CGTCGGCGAC GGCGCCGCGT TGAAAAGCCA CGGCATCGCA
TCGATGCATC ATCTGCCGGG GGTCGGGCAG AATCTGCAGG ATCATCCCGA CTTCATCTTC
TCCTACATGT CGGACAGCCC TCACTTTACG GGCACCAGCT TCAACGGCAT CGGCCGGCTG
CTGTCGAGCA TCGGCCTGTA TCGCCGCGAG GGCCGCGGCC CGCTGACGAC CAATTTCGCC
GAGTGCGGCG GCTTCCTGAA AACGCGGCCG GATCTCGACA TTCCCGACAT TCAGCTGCAT
TTCGGGATGG CGATGGTCGA CGACCACGGC CGCAAGCGGC ACTGGGGCAC GGGCTTCTCC
TGCCACGTCT GCCTGTTGCG GCCGAAGAGC CGCGGCCGCG TCGGGTTGAC CAGCGCCGAT
CCGCTGGCAC CGCCGCTGAT CGATCCGAAC TTCTTCGGCG AGCCGGACGA TCTCGAGGCG
ATGGTCGCCG GTTACAAAAC GACGCAGCGG CTGGTGGACG CACCGGCGTT GCGCGCGCTG
CAGCAGAAGA ACCTGTTCAC AGCGGATGTC CGCACCGACG ACGACATCCG CGCCATCCTG
CGCGCCCGCA CCGACACCGT GTATCACCCC GTCGGCACCT GCAAGATGGG CACGAACGAT
CCGATGGCGG TGGTCGATTC ACGGCTCAGG GTTCACGGCG TCGGAGCCTT GCGCATCGTC
GACGCCTCGG TGATGCCGAC CCTGATCGGC GGCAACACCA ACGCGCCGAC GATCATGATC
GGCGAGAAGG CGGCGGATAT GATTCGGGAA GAGATGCGGG CGATGTGA
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| Protein sequence | MTDTYDFVVV GGGSGGCAVA GRLSEDPGTS VALLEAGGTA DNWVVKTPYA LSLMVPGKLN
NWHFETVPQA GLNGRIGYQP RGKGLGGSSA INAMVYIRGH KWDYDHWAEL GNAGWSYEDV
LPYFKRSENN SDFNGAYHGQ NGPLHVNKLR TDNPAHDIFL QAAREAQFRI RDDFNGEEQE
GLGLYQLTQH NGERWSAARA YVHPYMTTRP NLRVETQAQA TRILFEGGRA VGVEYRQNNE
TRQVRARREV IVASGAFQTP QLLLLSGVGD GAALKSHGIA SMHHLPGVGQ NLQDHPDFIF
SYMSDSPHFT GTSFNGIGRL LSSIGLYRRE GRGPLTTNFA ECGGFLKTRP DLDIPDIQLH
FGMAMVDDHG RKRHWGTGFS CHVCLLRPKS RGRVGLTSAD PLAPPLIDPN FFGEPDDLEA
MVAGYKTTQR LVDAPALRAL QQKNLFTADV RTDDDIRAIL RARTDTVYHP VGTCKMGTND
PMAVVDSRLR VHGVGALRIV DASVMPTLIG GNTNAPTIMI GEKAADMIRE EMRAM
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