| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1501 |
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| Symbol | |
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| ID | 4021980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1672261 |
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| End bp | 1673022 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637961695 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_568639 |
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| Protein GI | 91975980 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCCAC TGTTCGACGT CAGCCGGGAA TTCGTTCTGG TCACTGGCGC ATCGCAAGGG
CTCGGCCGCC AGTTCGCGCG CGTGCTGGCC GAGCGCGGCG CCGGCATCGT GCTCGCCGCG
CGCCAGATCG ACAAGCTGAA AAGCCTCGAA CAGGAGATCA AGGACAAGGG CGGCCGCGCC
GTCGCGGTGC CGTTGGACGT CACCGATCTC GCATCGATGG CGACGGCGAT CGATCGCGGC
GAGGCCGCCC TCGGCCCCGT CACCGTGCTG ATCAACAACG CCGGCATTGC GGTCGAGAAG
CTCGCGGTCG AGCAGAGCGA AGCCGATTGG GACGCCGTGA TCGGCGCCAA TCTCAAGGGG
GCTTACTTCC TCGCAACCGA GGTCGCGCGG CGGATGATTG CGCGGCAGCA GGGCGGCAAC
ATCGTCAATA TCGCTTCGGT GCTCGGCGAT AGCGTGATGA AGTTCCTGTC GCCTTACGCG
GTGTCGAAGG CCGGCATCAT CCAGGCCACC AAAGCCCTCG CGCTCGAACT CGCGAGCGCC
CGCATCCGCG TCAACGCGCT GGCGCCGGGC TACATCGACA CCGACATCAA CCACGCGTTC
TGGTCGACGC CTGGCGGGGA GAAACTGATC AAGGGCATTC CGCAGCGACG CGTCGGCCAC
GAATCCGACC TCGACGGCGC GATCCTGCTG CTGGCGTCGA ATGCGTCGCG CTACATGACG
GGAAGTGTGG TGACGGTGGA TGGCGGGTTC TTGTTGGCGT AG
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| Protein sequence | MDPLFDVSRE FVLVTGASQG LGRQFARVLA ERGAGIVLAA RQIDKLKSLE QEIKDKGGRA
VAVPLDVTDL ASMATAIDRG EAALGPVTVL INNAGIAVEK LAVEQSEADW DAVIGANLKG
AYFLATEVAR RMIARQQGGN IVNIASVLGD SVMKFLSPYA VSKAGIIQAT KALALELASA
RIRVNALAPG YIDTDINHAF WSTPGGEKLI KGIPQRRVGH ESDLDGAILL LASNASRYMT
GSVVTVDGGF LLA
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