Gene RPD_1498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1498 
Symbol 
ID4021977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1669374 
End bp1670429 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content63% 
IMG OID637961692 
Producthypothetical protein 
Protein accessionYP_568636 
Protein GI91975977 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCAGA TTCAAGCAAG CGAACGAGCC CGGCCGTGTA GGTCGCGCGT GGATAACTGG 
AACGGCCGAT CAAGCCGTTT GTTGCTCGGC TTGCTAGCTA TTTTGGCAGC CACGACGCCG
GCTGCAGCGA AACTCGACTA TCCGATGCGC GCCATCACCG TGATCGTGCC GTTCGCCGCA
GGCGGCCCCA CTGACATCGT CGCACGCATC GTCACCGCCC ACATGGCGAA GACCTTTCGC
CAACAGATCA TGATCGAGAA CGTCGTCGGC GCCGGTGGAA CCACGGCTGC CAGCCGCGCG
ATGCGCGCCG CGCCAGACGG CTACACACTC CTGATCGGCC ACATGGGAAC TCACGGGAAT
GCCGTCGCGG TCTACCCGCA GCTCGCCTAC GACCCGGTCA AGGACTTTGC GCCGATCGGA
CTTGTCATCG AAATGCCTTC GCTCGTCCTC GCGAGGGCGG ACCTGCCTGC CCAGAATTTA
GGCGATCTGG CTCGCTACCT GAACAATCAC TCCAAGCTCA CCACGATGGC CCACGCCGGT
ATCGGCTCGG TCTCCTACGC AACGTGTACG CTTCTGAACT CGATCATCGA CGCTCATCCG
GCAACGAAAG CATATCAAGG CACCGGCCCT GCATTGCAGG CGCTCATGGC CGGGCACGTC
GATTACATGT GTGATCAGAT CGTCAGTGCA TTCCCTCGCA TAAAGTCAGG AGACGTCAAG
GCGCTGGCGA TCGTGTCGCC GCGGCGCAGC CCGGTGCTGC CAGACGTGCC GACCGCGACC
GAAGCCGGAA TCGGGAATTT CGCAATCACG GCGTGGAACG CACTGTTCGC GCCGAAAGGC
ACGCCGCGGG AACTGATCGA TCGTCTCAAC GCTGCGCTCG GCAGGGCGCT CGACGATCCC
GACGTGCGCA AGGAGTTGAC CGATCTCGGC AGCGAAGTGC CATCGGTCGA GGAACGCAGC
CCAGCTGAGC TCGCCAAGCG AGTCGAGAGC GAGGTTGCGC GATGGACCCC AAGTTCGAAG
CCACCCCCCG TGGGCGGCGA ACGGGTGGCA CAATGA
 
Protein sequence
MHQIQASERA RPCRSRVDNW NGRSSRLLLG LLAILAATTP AAAKLDYPMR AITVIVPFAA 
GGPTDIVARI VTAHMAKTFR QQIMIENVVG AGGTTAASRA MRAAPDGYTL LIGHMGTHGN
AVAVYPQLAY DPVKDFAPIG LVIEMPSLVL ARADLPAQNL GDLARYLNNH SKLTTMAHAG
IGSVSYATCT LLNSIIDAHP ATKAYQGTGP ALQALMAGHV DYMCDQIVSA FPRIKSGDVK
ALAIVSPRRS PVLPDVPTAT EAGIGNFAIT AWNALFAPKG TPRELIDRLN AALGRALDDP
DVRKELTDLG SEVPSVEERS PAELAKRVES EVARWTPSSK PPPVGGERVA Q