| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1465 |
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| Symbol | |
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| ID | 4021944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1635067 |
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| End bp | 1635786 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637961659 |
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| Product | transglutaminase-like |
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| Protein accession | YP_568603 |
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| Protein GI | 91975944 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.725326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCGACG ACAACCCGAC AAGCCACTCG GAACGCACGG TCTGCCTCAG CCCGGCGGAG
TTCGTCGACA GCGACCATCC CGAGGTGAAG GCGCTCGCAG CCCGGGCGAC CGCCGGCGCC
GCGACCCAAG GCGACAAACT CCGCGCGCTG TATCTGGCGG TGCGCGACGG CGTCCGCTAC
GACCCTTACG TCGATTTCAG AAGCGCCGAG GTGTTTCGCG CCTCGAGCGT GTTGCGCGCG
CAGCGCGGCT ATTGCGTCGG CAAGGCCGCG GCCTTCGCGG CCCTGTGCCG CGCGTCTGAG
ATTCCGGCGC GGGTGCGCTT CGCCGACGTG CGCAATCATC TGGCGACCGA GAATCTCACG
CGGACGATGG GCACCGATCT GTTCGCCTGG CACGGCTACA CCGAATGCTG GACCGGCGAA
CGCTGGGTCA AGGCGTCGCC GACCTTCAAT CTGACGCTGT GCGAAAAGCT CGGCGTCGCC
CCGCTCGATT TCGACGGCCG CACCGACGCG GTGATGCAGG CGTTCGACAC CAACAATGCG
CGCTTCATGG AATACGTCCG GGACCATGGC GCTTACTTCG ACGTGCCGGT CAAATTCCTG
CAGGCCGAAA TGTTCGCGCA GTACCCCCAC CTCGCCCGCG AGGACGGATT GGGTGGCGAC
ATGGAGACCG AGGCGACCCA AGAGGCGGAA GGCCGAGGGC CGAGGCAGTC CGGCCGCTAG
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| Protein sequence | MIDDNPTSHS ERTVCLSPAE FVDSDHPEVK ALAARATAGA ATQGDKLRAL YLAVRDGVRY
DPYVDFRSAE VFRASSVLRA QRGYCVGKAA AFAALCRASE IPARVRFADV RNHLATENLT
RTMGTDLFAW HGYTECWTGE RWVKASPTFN LTLCEKLGVA PLDFDGRTDA VMQAFDTNNA
RFMEYVRDHG AYFDVPVKFL QAEMFAQYPH LAREDGLGGD METEATQEAE GRGPRQSGR
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