| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1452 |
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| Symbol | |
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| ID | 4021930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1622444 |
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| End bp | 1623337 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637961645 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_568590 |
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| Protein GI | 91975931 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTGGG ACAAGCTCAA GGTCTTCCAC GCCGCCGCCG AAGCCGGCAG CTTCACTCAT
GCCGGTGAAC AGCTCGGGCT GTCGCAGTCG GCAGTGTCGC GACAAGTCAG CGCACTCGAA
CAGGAACTGT CGGTGTCGCT GTTTCATCGG CACGCCCGCG GCCTGATCCT GACCGAACAG
GGCGACCTGC TGTTCCGGAC CGCGCATGAT GTCTTCATGC AGCTTCAGGC CGCCCGCGCC
AAGTTGACCG ACAGCCGGGA ACGGCCGAGC GGCGACCTCA AGATCACCAC CACGCCGGGC
CTCGGCATCC ATTGGCTGGT GCCGCGGCTC GGGGAATTCA CGGCGCTCTA TCCGGAGATC
CGGATCTCGC TGATCGTCAC CGACGAAGAA CTCGACCTTT CGATGCGCGA GGCCGACGTC
GCGATCCGCA CCCGCAAGCC GACCCAGCCC GACCTGATCC AGCGCAAGCT GTTCTCGATC
GGCTTCCATG CTTATTGCTC ACCGGAATAC ATCAAGCATT TCGGCACGCC GCGCACGCTG
GAAGAACTCG ACAATCATCG CCTGATCATG CTGAGCGACA GCCAGGTCCC GCAGCATCTG
CAGAACCGGA GCTGGCTGGT GGATGCCGGC CGCAACGGTT CTGGCCCGCG TGAGCCTTAC
TTCAAGGTCA ACAACATCCT TGGTCTGGTG CGCGCGTGCC AGCAGGGCCT CGGCATCGCC
GCGTTGCCAG ACTATCTGGT CGAGGATCCG AACCGGCTGG TGCAATTGTT CGGTGAAGAG
GATTCGATCC AGCTCGACAC CTACTTCGTT TATCCCGAGG AATTGAAGTC GGTCGCGCGC
GTTCAGGTGT TTCGCGATTT CGTGGTCAAC AAGGCGCAGC GCTGGCCGAG CTGA
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| Protein sequence | MDWDKLKVFH AAAEAGSFTH AGEQLGLSQS AVSRQVSALE QELSVSLFHR HARGLILTEQ
GDLLFRTAHD VFMQLQAARA KLTDSRERPS GDLKITTTPG LGIHWLVPRL GEFTALYPEI
RISLIVTDEE LDLSMREADV AIRTRKPTQP DLIQRKLFSI GFHAYCSPEY IKHFGTPRTL
EELDNHRLIM LSDSQVPQHL QNRSWLVDAG RNGSGPREPY FKVNNILGLV RACQQGLGIA
ALPDYLVEDP NRLVQLFGEE DSIQLDTYFV YPEELKSVAR VQVFRDFVVN KAQRWPS
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