Gene RPD_1356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1356 
Symbol 
ID4021833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1527172 
End bp1527456 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content59% 
IMG OID637961549 
Productputative cytochrome c, class I 
Protein accessionYP_568495 
Protein GI91975836 
COG category[C] Energy production and conversion 
COG ID[COG2010] Cytochrome c, mono- and diheme variants 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCTGA TGGTCAGCAC TGCTTCGGCG TCGACAGACG TCGAGCGGCG GGGACTGGTA 
TTTGCCAAAT CGCATTGCGC GCGCTGCCAC GCAATCGGCC GGACCGGCAA AAGTCGATTG
AAGAAAGCGC CGCCGTTCCG CACATTGCAC AACCGCTATC CGGTCGAGAC TCTGGCCGAG
GCGTTCGCCG AGGGCATTTA CACCGGACAT TCGAAGATGC CGGCGTTCGA GCTCGAGCCG
GATCAGATCA ACGACCTTTT GTCGTACCTG AAGAGCCTGG AGTAA
 
Protein sequence
MLLMVSTASA STDVERRGLV FAKSHCARCH AIGRTGKSRL KKAPPFRTLH NRYPVETLAE 
AFAEGIYTGH SKMPAFELEP DQINDLLSYL KSLE