Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1343 |
Symbol | |
ID | 4021820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 1511626 |
End bp | 1513158 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637961536 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_568482 |
Protein GI | 91975823 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGGATC AAGCCCAATC GTCATCGGAG GCCCTGGCGC GCGATAGGCG GCTGCAGCAG GGCATCGATA GCTACGGCGT GGGAAGTTGG GAATTGAATC TCGCCACGCG GGAATTGGCG TGGTCTGCGA CGACGCGACG ATTGCTCGGT GTCGCGCCCG ACGCACCGGT CGACTTCGAC ACCTTCGTCT CTCTGGTCGA TCCGGAAGAC CGCGACCGCG TCACGCAGGC GGTGCAGCGC ACGATCGAGC ACAGCGAGTA CCTCGACATC ATGTTTCGGG TCGCCGACAG GGGCCAGCCG AGCCATTGGC TGCGCGCCCG CGGCGGTCTC GTCAGGGAGA ACGGCACGGC CGGCTACCTG TGCGGCATCG TGCTCGACAT CGACCAGCAG AAGGTGCTCG AACAGGAACT TAGGCTGCAG CAGAATCAGC TCCGCTCGAT TCTCGACACG GTGCCTGATG CGATGATCCT GATCGACGGC CGCGGCATCA TGCGGTTCTT CTCCAGCGCC GCAGAGCGGA TGTTCGGACT GTCCGAGAGA GAAGCGATCG GCCAGAACAT CAGCATCTTG ATGCCCCGGC CGGACGCGTC ACGCCACGAC AATTACATTT CCCGCTACAG CAATACGGGC GAGCGCCACA TTATCGGCAT CGGCCGCATC GTCACCGGCC AGCGCAAGGA CGGCACCACC TTCCCGATCC ATCTGTCGAT CGGCGAGATG GTGTCCAGCG GCGAGCGATA TTTCACGGGG TTCATCCGTG ACCTCACCGA ATATCAGCAG ACCCAGGCGC GGCTGCACGA ACTGCAGGCG GAGCTGGTGC ACGTCTCGCG GCTGACAGCG ATGGGCGAGA TGGCGTCGGC GTTGGCGCAC GAGCTCAACC AGCCGCTGTC GGCAATCAGC AACTACATGA AGGGCTCGCG CCGGCTGCTC GCGGGGAGCA GCGACCCGAA CATCTCCAAG ATCGAAAACG CGATGGAGCG CGCCGCCGAG CAGGCACTGC GCGCAGGCCA GATCATCCGA CGGCTGCGCG ACTTCGTCGC CCGCGGCGAA TCCGAAAAGC GGGTCGAGAG CCTCGCCAAG CTGGTCGAGG AAGCCGGTGC GCTGGGCCTG ACCGGCGCGC GCGAGCAGGG CGTGGTGTTG CGCTTCCACA TGGACCAGGC CAACGATCTG GTGCTGGTCG ACCGCGTGCA GATCCAGCAA GTGCTCGTCA ATCTGTTCCG AAATGCGCTC GAGGCGATGG CGACTTCACG GCGCAAGGAG TTGTCCGCGT CGAATGCACG GGTGGCGGAC GACATGATCG AGGTGACGGT GGCCGACAGC GGCAGCGGCA TCCCCGACGA CGTCAAGGCC AAACTGTTCC AGACATTTTT CACTACCAAG GACACCGGAA TGGGCGTTGG ACTATCCATC AGCCGCTCGA TCATCGAGGC CCATGGCGGC CGGATGTGGG CTGAAACCAA CAGCGCTGGC GGCGCGACGT TTCGCTTCAC GCTGCCGATG GCGCCGGGCG AGGACGTGAC CGATGCCGCA TAA
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Protein sequence | MTDQAQSSSE ALARDRRLQQ GIDSYGVGSW ELNLATRELA WSATTRRLLG VAPDAPVDFD TFVSLVDPED RDRVTQAVQR TIEHSEYLDI MFRVADRGQP SHWLRARGGL VRENGTAGYL CGIVLDIDQQ KVLEQELRLQ QNQLRSILDT VPDAMILIDG RGIMRFFSSA AERMFGLSER EAIGQNISIL MPRPDASRHD NYISRYSNTG ERHIIGIGRI VTGQRKDGTT FPIHLSIGEM VSSGERYFTG FIRDLTEYQQ TQARLHELQA ELVHVSRLTA MGEMASALAH ELNQPLSAIS NYMKGSRRLL AGSSDPNISK IENAMERAAE QALRAGQIIR RLRDFVARGE SEKRVESLAK LVEEAGALGL TGAREQGVVL RFHMDQANDL VLVDRVQIQQ VLVNLFRNAL EAMATSRRKE LSASNARVAD DMIEVTVADS GSGIPDDVKA KLFQTFFTTK DTGMGVGLSI SRSIIEAHGG RMWAETNSAG GATFRFTLPM APGEDVTDAA
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