| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1325 |
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| Symbol | |
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| ID | 4021802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1491450 |
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| End bp | 1493258 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637961518 |
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| Product | cyclic beta-1,2-glucan ABC transporter |
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| Protein accession | YP_568464 |
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| Protein GI | 91975805 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR01192] glucan exporter ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.252181 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTGT TTCGTCTTTA TACGCGCGTT CTCGAACTGC TCGGCAAGGA GCGGCGGCTC
GGCTGGACCC TGGCGGTCGC CAATTTGCTG CTGGCGACTG CACAATTCGC CGAGCCGGTG
CTGTTCGGCC GGATCATCGA TGTGATGTCC GGCAATCTCG CAACCGGCGC GCTGGTGCCG
GAGACCCGAT CGCCGTGGCC GCTGCTCGCC GCCTGGGTCG GCTTCGGCCT GTTCACCATT
CTGTGCTCGG CCACCGTCGC GCTGCACGCC GACCGGCTGG CGCATCGGCA GCGCCAGGCG
GTGCTGACCA GCTATTTCGA GCATATCCTG CAATTACCGC TGACCTTCCA CACCGGCACC
CATTCGGGGC GGCTGATGAA GGTGATGCTG CAAGGGACCG ACGCTCTCTG GCGCGTCTGG
CTCGGCTTCT TCCGCGAGCA CTTCGCCGCG ATCCTGTCGC TGGTCGTGCT GCTGCCGCTG
TCGCTCTACA TCAACTGGCG GCTGGCGATT TTGCTGTTTG CGCTGTGCGG GGTGTTCACC
GTGCTGACCA CGCTGGTGGT GCGCAAGACC TACGGGATGC AGAACGAGGT CGAGGCACAA
TACAGCGATC TGTCGGCGCG CGCGTCCGAC GCGCTCGGCA ACGTCGCGCT GGTACAGAGC
TACGTGCGGG TCGACGCCGA GGTCCAAGGC CTGCGCTTCG TCGCCGACAA GCTGCTTGCC
GCGCAGATGC CGGTGCTGTC GTGGTGGGCG CTGGTGACGG TGATTACCCG CGCCTCGACC
ACGATCACCG TGCTGGCGAT CTTCTCGCTC GGCATCGCGC TGAACCAGCA GGGCCTCACC
AGCGTCGGCG AGATCGTGAT GTTCGTTTCG TTCGCGACGC TGCTAATCCA GCGGCTGGAG
CAAGTCGTAA GCTTCGTCAA CAGCCTGATG ATGGAAGCGC CGCGACTGCA GGAATTCATC
ACCGTGCTCG ACGCAGTCCC GGCGGTGCGC GACCGACCGG ACGCGATCGA TCCCGGCCGC
CTCTCGGGCC TGGTCGAATT CCTCGACGTG TCGTTCTCCT ATGACGGCAA GCGCCCGGCA
ATCGAGGATC TATCGTTCAC CGCGCTGCCG GGGCAGACCA TTGCGCTGGT CGGCGCGACC
GGCGCCGGCA AATCGACCGC GATTGCGCTC CTGCATCGTG CATTCGATCC GCAGTCGGGC
GTCGTCAAGA TCGACGGCAT GGATGTGCGG GGGCTGACGA TGTCGGGCCT CCGGCGCAAC
ATCGGCGTGG TGTTTCAGGA AGCGCTGCTG TTCAACCGCT CGATCGCGGA GAATCTGCGT
GTCGGCAAAC CCGACGCCAC CGATGCGGAA TTGCGGCTGG CTGCCGAACG CGCGCAAGCG
CTCGACTTCA TCGACCGCAA CGATCTCGGC TTCGACACCA ATGCGGGCGA GCGCGGCCGG
ATGCTGTCCG GCGGCGAGCG CCAGCGGCTG TCGATCGCCC GCGCACTGCT GAAGGATCCG
CCGATCCTGA TCCTCGACGA GGCGACCTCG GCGCTCGACG CAGTGACCGA AGCCAAGGTC
AATCTCGCGC TCGACGAGGT GATGAAGGGC CGCACCACGT TCGTAATCGC GCACCGGCTA
TCCACCATCC GACACGCCAC GCGAATCCTG GTGTTCGACA ACGGCAAGGT GATCGAAAGT
GGAACCTTCG ACGAACTGGT GGCCCAGCGC GGGCGTTTCG CGGAGTTGGC GCGGGCGCAG
TTCATGGTGC AGGAGGAAGC GCGCGCCGCG GTCGCGACCG CGACCGACGA TGCGCCAGTC
AGGCTCTGA
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| Protein sequence | MSLFRLYTRV LELLGKERRL GWTLAVANLL LATAQFAEPV LFGRIIDVMS GNLATGALVP
ETRSPWPLLA AWVGFGLFTI LCSATVALHA DRLAHRQRQA VLTSYFEHIL QLPLTFHTGT
HSGRLMKVML QGTDALWRVW LGFFREHFAA ILSLVVLLPL SLYINWRLAI LLFALCGVFT
VLTTLVVRKT YGMQNEVEAQ YSDLSARASD ALGNVALVQS YVRVDAEVQG LRFVADKLLA
AQMPVLSWWA LVTVITRAST TITVLAIFSL GIALNQQGLT SVGEIVMFVS FATLLIQRLE
QVVSFVNSLM MEAPRLQEFI TVLDAVPAVR DRPDAIDPGR LSGLVEFLDV SFSYDGKRPA
IEDLSFTALP GQTIALVGAT GAGKSTAIAL LHRAFDPQSG VVKIDGMDVR GLTMSGLRRN
IGVVFQEALL FNRSIAENLR VGKPDATDAE LRLAAERAQA LDFIDRNDLG FDTNAGERGR
MLSGGERQRL SIARALLKDP PILILDEATS ALDAVTEAKV NLALDEVMKG RTTFVIAHRL
STIRHATRIL VFDNGKVIES GTFDELVAQR GRFAELARAQ FMVQEEARAA VATATDDAPV
RL
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