| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1306 |
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| Symbol | |
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| ID | 4021783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1470756 |
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| End bp | 1471475 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637961499 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_568445 |
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| Protein GI | 91975786 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCTGA CCGGCGCCAG CCGCGGCATC GGCCACGCCA CGGTGATCCG CTTCTCCAGC
GCCGGCTGGC GGGTGATCAC CTGCTCGCGC CACCCCTTCC CCGAGGAATG CCCTTGGGGC
GCTGGCCCTG AGGATCACAT CCAGATCAAT CTCGGCGACC GCGACGATAC GTTGCGCGGC
ATCGCGGAAA TCCGCGAACG CCTCGACGGC GATCAGCTCC ACGCTCTGGT CAACAATGCC
GCGATCTCGC CGAAAGCCGC CGGCGGCGGC CGGCTCGGCT CGATCGACAC CGAAATGGAC
ACCTGGGAGC ACGTGTTCCA CGTCAACTTC TTTGCGCCGA TCATGATGGC GCGCGGGCTG
ATCGCGGAAC TCAAGGCGGC GAAAGGCTCG GTGGTGAACG TCACCTCGAT CGCCGGCTCG
CGGGTGCATC CTTTCGCGGG GGCGGCCTAC GCCACCTCCA AGGCAGCGCT GGCCGCGCTG
ACGCGTGAGA TGGCGTCGGA TTTCGGCCGC ATCGGCGTTC GCGTCAACTC GATCGCGCCG
GGCGAGATCG ACACGTCGAT CCTGTCGCCG GGCACCGAAA AGATCGTCGA AGAAGACATC
CCGTTGCGTC GGCTCGGCAC CCCGGACGAA GTCGCCAAGA TCATCTACGT GCTGTGCACA
GAGACGTCGT CTTACGTGAA CGGCGCCGAG ATCCACATCA ACGGCGGCCA GCACGTGTAG
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| Protein sequence | MILTGASRGI GHATVIRFSS AGWRVITCSR HPFPEECPWG AGPEDHIQIN LGDRDDTLRG
IAEIRERLDG DQLHALVNNA AISPKAAGGG RLGSIDTEMD TWEHVFHVNF FAPIMMARGL
IAELKAAKGS VVNVTSIAGS RVHPFAGAAY ATSKAALAAL TREMASDFGR IGVRVNSIAP
GEIDTSILSP GTEKIVEEDI PLRRLGTPDE VAKIIYVLCT ETSSYVNGAE IHINGGQHV
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