| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1301 |
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| Symbol | |
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| ID | 4021778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1466166 |
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| End bp | 1466618 |
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| Gene Length | 453 bp |
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| Protein Length | 150 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637961494 |
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| Product | tRNA/rRNA methyltransferase (SpoU) |
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| Protein accession | YP_568440 |
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| Protein GI | 91975781 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
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| TIGRFAM ID | [TIGR00185] rRNA methylase, putative, group 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.959449 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGGATCG CCCTGTACCA ACCCGACATT CCGCAAAACA CCGGCACACT TCTTCGGTTT
TGCGCGTGTT TAAACCTCGA AGCTCACATC ATCGAGCCTG CAGGCTTTCC GACATCAGAT
CGGCATTTCC GGCGCGCGGG AATGGACTAT CTCGATCAGG TAACGATCCT GCGCCATGAT
TCCTGGTCAA AATTCGTGCA ATGGCGGAAG GAAGCTGACT GCCGAGTGAT TTTGCTTACA
ACGAAAGGCG TAACACCCTA TCTCGAACAA CGTTACCAAT CCACTGATGT GCTGCTGCTG
GGCCGGGAAA GCGCAGGCGT ACCGGACGAG GTCGCCGCAG CCGCCGATGC GCGCGTGCTG
ATCCCGATGC AACCGAAGAT GCGATCGCTC AACGTCGCGA TGGCCGCGGC GTTGGTGGTC
GGCGAAGCGC TCCGTCAGAC CCGTTACGGA TAA
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| Protein sequence | MRIALYQPDI PQNTGTLLRF CACLNLEAHI IEPAGFPTSD RHFRRAGMDY LDQVTILRHD
SWSKFVQWRK EADCRVILLT TKGVTPYLEQ RYQSTDVLLL GRESAGVPDE VAAAADARVL
IPMQPKMRSL NVAMAAALVV GEALRQTRYG
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