| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1275 |
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| Symbol | |
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| ID | 4021752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1438266 |
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| End bp | 1439222 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637961468 |
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| Product | regulatory protein, LuxR |
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| Protein accession | YP_568414 |
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| Protein GI | 91975755 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.720232 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.462877 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGCAG ACAAGGCGTC GGGTCTTCTC GCGGCCCAGA TTGTTTCGCT TCGTCACCTG
ATAGCGTTCG ACGCCGTCCA GGTGCTTTGC CGTCCTGCAC CGCAGGACAA TCACTTGGTC
CTGCTCTGTG AAGGCTATGG CTGCGCCAGC CGGAGGGCGC TGGCGGAAGC CTTTCCCGCA
CTCTACCCGC CCGGTTTCAC CGAGCTGTTC TCTCCCGGTG ACGGCCTGCC GCCTTCGATT
TGCGAATCCG ACGATGTAAT GCAGCCGGCG TTTCGTACGA CCGAAATCTA CACCGAGGCG
CTGAGCCGCG AAGGATTCCA GGACGGCCTG ACGATCGAAC TGCGCAGCGG TACGGACTAT
TTCGGATTGG CGCATTTCTC CGCGCGGCGG CCGACCACGT TCACCCGCGA CGTCCGTATG
ATGGCGCGCG GCTTTCAGGT GTCTCTGGAA GCGACGCTCG GGTCGCTTAT GCCGCGCCCC
GACAAGGCCA TCGTGGCGGT GCTGCGCAGA CGCGGCAACG CGCTGGTCGC GCTCGAAGCT
GTGCGGGACC AAGGGGCGGT CGTCACCAAC CGGTTGCTGA CGACGCTGTC GCGCCTGCCG
CCGGAGGCGA TGCCGCTGCA ATGCTGCTGG GTCTGCGAGC GCCCGTATCT GCTCAAGGCT
ACGCCAGTGG GCGCCGAGGA TCTGCTGATC GAATTGCTGC CGCAGCCATT GCCGGTCGGG
TTGAGCTATC GCGAGATGGT GGTGCTGAGC TGGCTGATGA TCGGCATGGC GGATCGCGAC
ATCGCGGCCG AGATGTTCAT CAGCGAACGC ACCGTGCACT CTCACGTCAC CGCGCTGCTG
CGCAAGCTCA AGGTCAAGCG GCGATCACAA GCAGCGATCA TCGCCGCGCT GAACCGCTGG
TTCATCCCTG ATCCGGCGGG GAAGATCGCA GGCGGTTACG CGAGCGTGAT GCGTTGA
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| Protein sequence | MGADKASGLL AAQIVSLRHL IAFDAVQVLC RPAPQDNHLV LLCEGYGCAS RRALAEAFPA
LYPPGFTELF SPGDGLPPSI CESDDVMQPA FRTTEIYTEA LSREGFQDGL TIELRSGTDY
FGLAHFSARR PTTFTRDVRM MARGFQVSLE ATLGSLMPRP DKAIVAVLRR RGNALVALEA
VRDQGAVVTN RLLTTLSRLP PEAMPLQCCW VCERPYLLKA TPVGAEDLLI ELLPQPLPVG
LSYREMVVLS WLMIGMADRD IAAEMFISER TVHSHVTALL RKLKVKRRSQ AAIIAALNRW
FIPDPAGKIA GGYASVMR
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