| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1252 |
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| Symbol | |
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| ID | 4021729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1414771 |
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| End bp | 1415532 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637961445 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_568391 |
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| Protein GI | 91975732 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCAC TCACCGACAG GATCGCTCTC GTCACAGGCG CAAGCCGTGG CATCGGCCGA
GCGATTGCCG TCAGGCTGGC GCAGGACGGC GCGATCGTTG GCATCCATTA TCGCGCCGAG
CGCGACAAGG CGGAGCAGAC GCTCGAACTG ATCCGGAGCC AAGGCGGCAA GGGCTTCGTC
GTCGCGGCCG ATCTCGCCGA TGCCGCAGGC GCCGCACACC TCGCCGATGA GTTGATCGCC
GAACTGCGCA CCCTGCGGAT TCCGGCGACG CTCGACATCC TCGTCAACAA CGCCGGCATC
GACGACCGCA AGACCATCGA TCAGGTGACC GAAGCCGATT TTGATCGCAT GGTGCAGGTC
AATCTGAAGT CGCCGTTCTT CCTGATCCAG AAGCTGCTGC CGGTGCTGGC GAACGGCGGC
CGCATCATCA ATATCTCCTC GATGGCGACG CGGCTGTCGT TTCCGACCAT GCCGGTCTAC
GCGCCGACCA AGGCGGCGCT GTCGACGCTG AGCCGCATCC TCGCCGTGCA TCTCGGCCCG
CGCTGCATCA CCGTGAACAC CGTGGCGCCG GGGGCGACCG CGACCGATCT CAATCCTGCC
GCGTCGGATC CGCAGCACAG CGAAGCGATC CGCGACAGCG TCGCGCTCGG CCGCATCGCC
GGGCCGGAGG ACATCGCGCC GATCGTCGCC TTCCTCGCCT CGCGCAACGG CGGCTGGATC
ACCGGCGAGA CGATCGAAGC CAGCGGCGGT CAGCGGCTAT GA
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| Protein sequence | MKPLTDRIAL VTGASRGIGR AIAVRLAQDG AIVGIHYRAE RDKAEQTLEL IRSQGGKGFV
VAADLADAAG AAHLADELIA ELRTLRIPAT LDILVNNAGI DDRKTIDQVT EADFDRMVQV
NLKSPFFLIQ KLLPVLANGG RIINISSMAT RLSFPTMPVY APTKAALSTL SRILAVHLGP
RCITVNTVAP GATATDLNPA ASDPQHSEAI RDSVALGRIA GPEDIAPIVA FLASRNGGWI
TGETIEASGG QRL
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