Gene RPD_1243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1243 
Symbol 
ID4021719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1406130 
End bp1406555 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content71% 
IMG OID637961435 
ProductNUDIX hydrolase 
Protein accessionYP_568382 
Protein GI91975723 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCCGC CTGAGCCGCC CCGCCATCCC CAGATCGCCG TCAGCGCCTC GATCTTTCGC 
GACGGCGATG TGCTGCTGGT TCGCCGGGCG CGGTCGCCTG GGCGGGGGCT CTACTCGCTG
CCGGGCGGGC GGGTCGAATT CAGCGAGACG CTCGAGGCCG CACTGGAGCG CGAGGTCCGC
GAGGAGACCG CGCTGACGAT CGGGATCGCC GGCTTTGCCG GATGGCGCGA GGTGGTGCCC
GGACCGGCCA ATGCAGGGCA CTACGTGATC CTGTCCTTCG CGGCGCGCTG GATCGCCGGC
GAGCCGGTGC TGAACGACGA ACTCGACGAC GCCGTCTGGG TTGCTCCGGA GGCGATCGGC
GATTTCAAGG TCACCGAAGG CCTGCCCGCC ATCGTCGCCG CCGCGCGCCG CCTGATCGGA
ACCTGA
 
Protein sequence
MTPPEPPRHP QIAVSASIFR DGDVLLVRRA RSPGRGLYSL PGGRVEFSET LEAALEREVR 
EETALTIGIA GFAGWREVVP GPANAGHYVI LSFAARWIAG EPVLNDELDD AVWVAPEAIG
DFKVTEGLPA IVAAARRLIG T