Gene RPD_1235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1235 
Symbol 
ID4021711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1400705 
End bp1401328 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content67% 
IMG OID637961427 
Productmetal-dependent phosphohydrolase 
Protein accessionYP_568374 
Protein GI91975715 
COG category[R] General function prediction only 
COG ID[COG1896] Predicted hydrolases of HD superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCC CTCCCAAGAC ATCGCAAGCC GCAGGCCGGG TCTGGCAGCG GATGCTGTCG 
GGCCGCCGGC TCGATCTGCT CGACCCCTCG CCGCTCGATG TCGAAGTCGA GGACATCGCC
CACGGCCTGG CGCGGGTGGC GCGCTGGAAC GGACAGACCA GCGGCGCCCA TATCTTCTCG
GTGGCGCAGC ACACCCTGCT GGTCGAGGCG GTAATGCGTG AGCGCAATCC CAGGATCGAT
GCGCGGTTGC GGCTGGCGGC CCTGCTGCAC GACGCCCCCG AATATGTGAT CGGCGACATG
ATCTCGCCGT TCAAGGCTGT GATCGGTGAA TCCTACAAGG CGGTCGAGCG GCGGCTGCTG
GCGGCGATCC ACATCCGATT CGGCCTGCCG GCCGCGCTCG ACGAGGCGAT CGAACGCCAG
ATCAAGGCCG CCGACCGCGG CGCCGCCTAT CTCGAAGCGA CCAGCCTCGC CGGCTTCACC
AAGGCCGAGG CCAAGCGGCT GTTCGGCAGC GATCCTGGCC TGCCGCAGAC GATGCAGGAC
GACTATCTGA CGCCGTGGTC CGCCGGAAAG GCCGAGAAAC GCTTTTTGAC GCGGTTCCAG
GCGCTGTGCG ATCCAGGTTC CTGA
 
Protein sequence
MTTPPKTSQA AGRVWQRMLS GRRLDLLDPS PLDVEVEDIA HGLARVARWN GQTSGAHIFS 
VAQHTLLVEA VMRERNPRID ARLRLAALLH DAPEYVIGDM ISPFKAVIGE SYKAVERRLL
AAIHIRFGLP AALDEAIERQ IKAADRGAAY LEATSLAGFT KAEAKRLFGS DPGLPQTMQD
DYLTPWSAGK AEKRFLTRFQ ALCDPGS