Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1235 |
Symbol | |
ID | 4021711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 1400705 |
End bp | 1401328 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637961427 |
Product | metal-dependent phosphohydrolase |
Protein accession | YP_568374 |
Protein GI | 91975715 |
COG category | [R] General function prediction only |
COG ID | [COG1896] Predicted hydrolases of HD superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCC CTCCCAAGAC ATCGCAAGCC GCAGGCCGGG TCTGGCAGCG GATGCTGTCG GGCCGCCGGC TCGATCTGCT CGACCCCTCG CCGCTCGATG TCGAAGTCGA GGACATCGCC CACGGCCTGG CGCGGGTGGC GCGCTGGAAC GGACAGACCA GCGGCGCCCA TATCTTCTCG GTGGCGCAGC ACACCCTGCT GGTCGAGGCG GTAATGCGTG AGCGCAATCC CAGGATCGAT GCGCGGTTGC GGCTGGCGGC CCTGCTGCAC GACGCCCCCG AATATGTGAT CGGCGACATG ATCTCGCCGT TCAAGGCTGT GATCGGTGAA TCCTACAAGG CGGTCGAGCG GCGGCTGCTG GCGGCGATCC ACATCCGATT CGGCCTGCCG GCCGCGCTCG ACGAGGCGAT CGAACGCCAG ATCAAGGCCG CCGACCGCGG CGCCGCCTAT CTCGAAGCGA CCAGCCTCGC CGGCTTCACC AAGGCCGAGG CCAAGCGGCT GTTCGGCAGC GATCCTGGCC TGCCGCAGAC GATGCAGGAC GACTATCTGA CGCCGTGGTC CGCCGGAAAG GCCGAGAAAC GCTTTTTGAC GCGGTTCCAG GCGCTGTGCG ATCCAGGTTC CTGA
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Protein sequence | MTTPPKTSQA AGRVWQRMLS GRRLDLLDPS PLDVEVEDIA HGLARVARWN GQTSGAHIFS VAQHTLLVEA VMRERNPRID ARLRLAALLH DAPEYVIGDM ISPFKAVIGE SYKAVERRLL AAIHIRFGLP AALDEAIERQ IKAADRGAAY LEATSLAGFT KAEAKRLFGS DPGLPQTMQD DYLTPWSAGK AEKRFLTRFQ ALCDPGS
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