| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1228 |
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| Symbol | |
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| ID | 4021704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1391442 |
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| End bp | 1393061 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637961420 |
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| Product | L-aspartate oxidase |
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| Protein accession | YP_568367 |
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| Protein GI | 91975708 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0029] Aspartate oxidase |
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| TIGRFAM ID | [TIGR00551] L-aspartate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.653188 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCA CAACTGAAAT CGGATCGCTA GGCGCCCATG GCGACATCGT TATCGTCGGT
GGTGGCCTCG CAGGGCTGTT CTGCGCGCTC AAGCTGGCGC CGCGGCCGGT GACGGTGATC
AGCGCGGCGC CGCTCGGCGA AGGCGCCTCG ACGGCGTGGG CGCAGGGCGG CATCGCTGCC
GCGGTCGGCG AAGGCGACAC CGCGGAATCC CATGCTGCCG ACACCATCGC GGTCGGCGCC
GGGCTGGTCG ACGAGGCGAT CGCGCTCGGG CTCGCACAGG AAGCCTCGGC GCGCATCCAT
GATCTGCTGG AATATGGCGT GCCGTTCGAT CGCGACCTCG AAGGCCGGCT GGCGGTGGCG
CGCGAGGCGG CGCATTCGGC GCGGCGCATC GTGCATGTGC GCGGCGACAT GGCCGGCAAA
GCGATCATCA CCGCGCTGAC CGAGGCGGTG CGCGCAACGA CGTCGATCCG CGTGATCGAA
GGCTGGTTCG CCGAAGCTCT GCTGACCGAC GGCGACGCCG TCGCCGGGCT GCAATTGCGC
AAGGCCGGTC ACGTCCTCAC CGCGCCGGTG ACGATCCCGG CGCGCGCCGT GGTGCTCGCC
ACCGGCGGCA TCGGGCATTT GTATGCGGTG ACGACCAATC CGCCGGAAGC CTCCGGCCAG
GGCCTGGCGA TCGCCGCGCG CGCCGGCGCC GTGATCGCCG ATCCGGAATT CGTGCAGTTT
CACCCGACCG CGATCATGGT CGGCCGCGAT CCGGCGCCGC TCGCCACCGA GGCGCTGCGC
GGCGAAGGCG CGACGCTGAT CAACGGCCGC GGCGAGCGCT TCATGCTGGC GCTGCATCCG
CTCGCCGAAC TGGCGCCGCG CGACATCGTC GCCCGCGGCG TGTTCGCCGA GGTCGCTTCC
GGACGCGGCG CGTTCCTCGA CGCGACGACC GCGCTCGGCG CGCATTTCGC CAAGGAATTC
CCGACCGTCT ATGAGAGCTG CATCTCGGCC GGCATCGATC CGGCGACGCA GCCGATCCCG
ATCGCCCCGG CGGCGCATTA TCACATGGGC GGTGTCGCGG TGGATGCGCG CGGCAGGACC
TCGCTGGACG GCCTGTGGGC GGCCGGCGAA GTGTCCTGCA CCGGTGCCCA TGGCGCCAAC
CGGCTGGCCT CGAACTCGCT GCTCGAAGCC GTGGTCTACG CGGCGCGGAT CGCCGAAGAC
ATCGGCGGCG CGGAGCTGCG TGCGGCGACG GGCCGGTTCG ATCCGGCGGC GCGGATGCGC
GACGCGGCGC TCGACCCGGC GCAGGAGCGG GACTTGCGTG CGATGATGTC GGCCAAGGTC
GGCGTGATCC GCGACCGCGA CGGCCTCACC GAAGCGGTGC GCGCCTTCGC GGCGCTGGAA
GCCGATGCGA CCTCGACCGC GCTCGCCAAC ATGGCGACGG CGGCGCTGCT GGTCGCGACC
GCCGCGCTGG CGCGGATCGA GAGCCGCGGC GCGCATTATC GCTCCGACTA TCCGGCCGAG
AATCCGACGC TCGCCGAGCG CAGCATGACC ACGCTCGCGC AGGCCCGCGA ACGCGCAGGC
GCGCTGGCCG GCGGCGGTGC GACGATCAGG ACGCTGCACA CCCACACCGC CCTCGCCTGA
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| Protein sequence | MSTTTEIGSL GAHGDIVIVG GGLAGLFCAL KLAPRPVTVI SAAPLGEGAS TAWAQGGIAA
AVGEGDTAES HAADTIAVGA GLVDEAIALG LAQEASARIH DLLEYGVPFD RDLEGRLAVA
REAAHSARRI VHVRGDMAGK AIITALTEAV RATTSIRVIE GWFAEALLTD GDAVAGLQLR
KAGHVLTAPV TIPARAVVLA TGGIGHLYAV TTNPPEASGQ GLAIAARAGA VIADPEFVQF
HPTAIMVGRD PAPLATEALR GEGATLINGR GERFMLALHP LAELAPRDIV ARGVFAEVAS
GRGAFLDATT ALGAHFAKEF PTVYESCISA GIDPATQPIP IAPAAHYHMG GVAVDARGRT
SLDGLWAAGE VSCTGAHGAN RLASNSLLEA VVYAARIAED IGGAELRAAT GRFDPAARMR
DAALDPAQER DLRAMMSAKV GVIRDRDGLT EAVRAFAALE ADATSTALAN MATAALLVAT
AALARIESRG AHYRSDYPAE NPTLAERSMT TLAQARERAG ALAGGGATIR TLHTHTALA
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