| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1225 |
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| Symbol | |
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| ID | 4021701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1387746 |
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| End bp | 1389170 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637961417 |
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| Product | cell wall hydrolase, SleB |
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| Protein accession | YP_568364 |
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| Protein GI | 91975705 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3773] Cell wall hydrolyses involved in spore germination |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.31402 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGTCA TGCGTAACCG GCCGAAGGGC GCACGGATTG CGTCCTTCGG TCTCGGGCTC
TGCGTTTTCG CGGTGTTCCC GACCGAAATC GGCTATCAGG ATATCGCCTC GCTGCTGGTT
CGCCAGCCGG GCGTCACCGA GCGTTGGCAG AAGCGGATGT TCGCTTCGTC GTTCGGCTCG
ATCCAGGTCG CGACCTTTTC GTTCGGCCGT CCGATCGGCA CCTGGGCGCC GCAGGGCGCC
GACTCTCGTC TCGCCAGCCT CGACGGCAAG CTCGGCCTGG TCGGCGCGCG GACCCGCAAT
CCGCTGGCGC AGCCGCCGTC GCGCTATCAG GCGTCGGATT TTCCCGCCGT CGATCGCACG
CTGAAGGGCG ATCGTCTCGC GATCTTCAAG CCGGGGACTG CGACGCCGGA TGACGCCGCG
CCATCGGCGA GCGACGATCC GAACGCGCCG AACGTCGCCG GCGCCAAAAC CGCCGAACTG
GCGCCCACCG ACAATTCGCC GCTCGATCCG GAACTCGCGG AAGCGCTGAA GTCCGAGCCT
TTGCCGCAAT ACGACGCTGC GCATGCGCTC GAGGCGGACA CGCTTCATGT CGCGCTGCAT
CCCAAGTCGC CGGATCGCGC CGAGACGGCC GCCGCGCCGC CTCGCGATCC GTTCACCTTC
AAGACGTCGA TCCTTTTCTT CGGTACCGGC TCGCTCGGCG GCCCCGAGGA ATCGCTCGAA
CAGTGGCAAC CCGGCGAAGA GCCGATGATC GTCACGCCGC ACGGCGCCGA TCCGGACATG
AAGCAGCCGC TGCTGTCGGC GACCGCGGTC GATCCGGAAG CGGCCGGCCT ATCCGTCGCC
GGCAAGGGCG AGGTGAACGC CGATCATCAC GCCAAGACGC CGGCCGAGCG GCTCGGCCTG
TTCGACGCGA AGCTGCGCGC CAAGCACGAG AAATGCCTTG CCGAGGCGGT GTATTTCGAA
TCGCGCGGCG AGAAGGTGCG CGGCCAGATC GCGGTTGCGC AGGTCGTGCT CAACCGCGCT
TTCTCGGGCT TCTACCCGAA CAATGTCTGC GGCGTGGTGT ACCAGAACAA GCACAGGCGG
CTCGCCTGCC AGTTCACCTT CGCCTGCGAT CGCGTCGCCG ACGTCGTCCG CGAGCCGGAA
ATGTGGGATC GCGCCCGCAA GATCGCCAAG GCGAGCCTCG ACGGCAAGCT GTGGCTGCCG
GAAGTCGCCA AGTCGACGCA CTATCATGCC TATTGGGTGC GGCCGTCCTG GGTGCACGAG
ATGAAGAAGA TGTATCGCAC CGGCGTGCAC ACCTTCTACC GCCCGCGCAA CTGGGGCGAC
GGCAGCGAAG CGCCGAGCTG GGGCGATGCG TCGGAAACCG CAGCCATCAG CGCCCAACTC
GCCGAAGCGG CGAAGAGCTC GGCGGAGATC AACGCGAAGA ATTGA
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| Protein sequence | MSVMRNRPKG ARIASFGLGL CVFAVFPTEI GYQDIASLLV RQPGVTERWQ KRMFASSFGS
IQVATFSFGR PIGTWAPQGA DSRLASLDGK LGLVGARTRN PLAQPPSRYQ ASDFPAVDRT
LKGDRLAIFK PGTATPDDAA PSASDDPNAP NVAGAKTAEL APTDNSPLDP ELAEALKSEP
LPQYDAAHAL EADTLHVALH PKSPDRAETA AAPPRDPFTF KTSILFFGTG SLGGPEESLE
QWQPGEEPMI VTPHGADPDM KQPLLSATAV DPEAAGLSVA GKGEVNADHH AKTPAERLGL
FDAKLRAKHE KCLAEAVYFE SRGEKVRGQI AVAQVVLNRA FSGFYPNNVC GVVYQNKHRR
LACQFTFACD RVADVVREPE MWDRARKIAK ASLDGKLWLP EVAKSTHYHA YWVRPSWVHE
MKKMYRTGVH TFYRPRNWGD GSEAPSWGDA SETAAISAQL AEAAKSSAEI NAKN
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