Gene RPD_1186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1186 
Symbol 
ID4021662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1344043 
End bp1344435 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content64% 
IMG OID637961378 
Productnitrogenase-associated protein 
Protein accessionYP_568325 
Protein GI91975666 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1393] Arsenate reductase and related proteins, glutaredoxin family 
TIGRFAM ID[TIGR01616] nitrogenase-associated protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGG TGGTTTTCTA CGAGAAGCCC GGCTGCGTCG GCAATGCACG GCAGAAGGCG 
CTGCTGATCG CATCCGGCCA CGAACTCGAA GTCCGCAATC TGCTGAGCGA GACCTGGACA
CCTGAGACGC TGCGGCCGTT CTTCGGCAGC AAGCCGATTC CCGAATGGTT CAACGCGTCG
TCGCCGAAGG TGAAAGCCGG CGCGATCGAT CTTGCCGCCC TCACGGAGAA TTCGGCCCTG
GCGATGATGA TCGAAGATCC GCTCCTGATC CGCCGACCGC TGATGCAGGC CGGCGATCGC
CGCGAATCCG GCTTCGATCA GACGCTCGTC GATGCCTGGA TCGGCCTGCG CCCAACCGAG
GCGCCCCTCA CCGATCGCTG CGCGATGGAG TAG
 
Protein sequence
MAKVVFYEKP GCVGNARQKA LLIASGHELE VRNLLSETWT PETLRPFFGS KPIPEWFNAS 
SPKVKAGAID LAALTENSAL AMMIEDPLLI RRPLMQAGDR RESGFDQTLV DAWIGLRPTE
APLTDRCAME