| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1178 |
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| Symbol | |
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| ID | 4021654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1336136 |
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| End bp | 1337182 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637961370 |
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| Product | hydrogenase expression/formation protein HypE |
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| Protein accession | YP_568317 |
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| Protein GI | 91975658 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0309] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR02124] hydrogenase expression/formation protein HypE |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.668048 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACC GCACCCGCAG GCGCAAGCTC GATATCAAAA ACGGTCGGGT CGACCTGTCG
CACGGCGCCG GCGGCCGCGC CATGGCGCAT CTGATCGGCG AGATTTTCCA TGAGGCGTTC
GACAACGATC TGCTGCGCCG CGGCAACGAT CAGGCGGCGT TCGATGTCGT CGGCGGACGG
ATGGTGATGA CGACGGACGG CTATGTGGTG TCGCCGCTGT TCTTTCCCGG CGGCGACATC
GGCTCGCTGG CGGTGCACGG CACCATCAAC GACGTCGCGA TGGCCGGGGC CAGGCCGCTG
TATCTGTCCG CCGGCTTCAT CATCGAGGAG GGGTTCCCGC TCGCCGATCT GAAGCGCATC
GCCGACAGCA TGGGCGCGGC GTCGCGCGAG GCCGGCGTGC CGATCGTCAC CGGCGATACC
AAGGTGGTCG AACGCGGCAA GGCCGACGGC GTGTTCATCA CCACCACGGG CGTCGGCGTC
GCGCCGGCAG AGCTGGTGCT GTCGTCCGAA TTGGCGTGCC CCGGCGACAA AGTCCTTCTC
TCCGGCTTCA TCGGCGATCA CGGCGTTGCG GTGATGTCGC AGCGGCAGAA CCTCGCCTTC
GAGACGTCGA TCGTGTCGGA TTCCGCCGCA TTGCATGAAC TGGTCGCCGC GATGGTCGCC
GCCGCGCCGC AGGCGCTGCG GGTGATGCGC GATCCGACCC GCGGCGGGCT CGCGGCGACG
TTGAACGAAT TGGCGCAGCA ATCGGCGATC GGCTTCCGGC TCGACGAGGA CGCGGTGCCG
ATCCGGCCCG AGGTCGCGGC GGCCTGCGAG CTGCTCGGGC TCGATCCGCT TTACGTCGCC
AATGAAGGCA AGCTGATCGC CATCGTCGCA TCCGAGGCGG CGGACACCGT CCTCGCGGCG
ATGCGCGCGC ATCCGCTCGG GCGTGATGCC GCGATCATCG GCGAGGTGAT CGCCGACGAT
CATCACTTCG TGCAGATGAC CACGTCATTC GGCGGCGGGC GGATCGTCGA CTGGCTGTCG
GGCGAGCAAT TGCCGCGAAT TTGTTGA
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| Protein sequence | MSDRTRRRKL DIKNGRVDLS HGAGGRAMAH LIGEIFHEAF DNDLLRRGND QAAFDVVGGR
MVMTTDGYVV SPLFFPGGDI GSLAVHGTIN DVAMAGARPL YLSAGFIIEE GFPLADLKRI
ADSMGAASRE AGVPIVTGDT KVVERGKADG VFITTTGVGV APAELVLSSE LACPGDKVLL
SGFIGDHGVA VMSQRQNLAF ETSIVSDSAA LHELVAAMVA AAPQALRVMR DPTRGGLAAT
LNELAQQSAI GFRLDEDAVP IRPEVAAACE LLGLDPLYVA NEGKLIAIVA SEAADTVLAA
MRAHPLGRDA AIIGEVIADD HHFVQMTTSF GGGRIVDWLS GEQLPRIC
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