| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1174 |
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| Symbol | |
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| ID | 4021650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1331557 |
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| End bp | 1332495 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637961366 |
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| Product | hydrogenase accessory protein HypB |
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| Protein accession | YP_568313 |
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| Protein GI | 91975654 |
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| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
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| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.150463 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTACGG TTTGCGGATG CGGCGATAGC AGCGTGGATC CCGGCCATGC CCACGGGCAC
GCGCACGACC ATGATCACCC GCATGATCAT GCGCATCCCC ACGGTCATGA TTACGCTCAC
CCGCACGATC ATGATCACGG CCACGAGCCT CATCACCATG ACCATCATCA CAATCACGAC
CACGCGCATC CGGCGGCGGC GGCGGGCAGT CTCGATTTCG GCGGCGGCAT CGCCGGCGTG
CACGTGGCTG GCCTGACACA GGCGCGGGTG GTGCAGATCG AGCGCGATAT CCTGTCCAAG
AACGACAGCT ACGCCGCCGC GAACCGCGCG CGCTTCGCGG CCAGCGGCGC CTTCGCGCTC
AACTTCGTCT CCAGCCCGGG CTCGGGCAAG ACCACGCTGC TGGTGAAGAC CATCACCGAC
CTCAAGGATA GCTATCCGAT CGCGGTGATC GAGGGCGATC AGCAGACCGC TAACGACGCG
GAGCGGATCA GGGCGACCGG GGCGCCGGCC ATCCAGATCA ACACCGGCAA GGGCTGCCAT
CTCGACGCCC ACATGGTCGG CCACGCGCTC GATCAGTTGC CGGCTGTGAG CGGCGGCCTG
TTGTTCATCG AGAATGTCGG CAATCTGGTC TGTCCGGCCG CGTTCGATCT CGGCGAGGCG
CACAAGGTGG TGGTGCTGTC GGTCACCGAG GGCGAGGACA AGCCGCTGAA ATATCCGCAT
ATGTTCGCGG CCGCCGATCT GTTGCTGCTG AACAAGATCG ATCTGTTGCC GCATCTCGAT
TTCGATCTCG CCGCGACCAT CGAATACGCC CGCCGGGTCA ATCCGAAGAT CGAGGTGCTG
CTGGTGTCGG CGAAGAGCGG TGAGGGGCTG CCGGCGTTCT ACGCCTGGAT CGCCAAGCGC
GCCGCGGCCG CCCGCGCCGC CGCCAAAGCC GCCGGGTAG
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| Protein sequence | MCTVCGCGDS SVDPGHAHGH AHDHDHPHDH AHPHGHDYAH PHDHDHGHEP HHHDHHHNHD
HAHPAAAAGS LDFGGGIAGV HVAGLTQARV VQIERDILSK NDSYAAANRA RFAASGAFAL
NFVSSPGSGK TTLLVKTITD LKDSYPIAVI EGDQQTANDA ERIRATGAPA IQINTGKGCH
LDAHMVGHAL DQLPAVSGGL LFIENVGNLV CPAAFDLGEA HKVVVLSVTE GEDKPLKYPH
MFAAADLLLL NKIDLLPHLD FDLAATIEYA RRVNPKIEVL LVSAKSGEGL PAFYAWIAKR
AAAARAAAKA AG
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