| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1152 |
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| Symbol | |
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| ID | 4021628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1309995 |
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| End bp | 1311611 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637961344 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_568291 |
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| Protein GI | 91975632 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.296162 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTGT CGCGCTTCGA GATCAACCGC CGGACCGTCC TGCTGACGTC GGCCGCCATC
GCCGCCAATG TACTCAATCC GATGCGGGCG TTCGCGCAGG AGACGCCGCG CAAGGGCGGG
GTGTTCAACG TGCATTACGG CGCGGAGCAA CGCCAGCTCA ACCCCAGCTT GCAGGCATCG
ACCGGCGTGT ACATCATCGG CGGCAAGATC CAGGAGCCGC TGGTCGATCT CGACGCCGCC
GGCAATCCGG TCGGCGTGCT GGCGGAGAGC TGGGAATCGA CGCCGGACGG CAAGACGATC
ACTTTCAAGC TGCGCAAGGG CGTCGTCTGG CACGACGGCA AGCCGTTCAC CTCCGAGGAC
GTCGCCTTCA CCGCGCTGAA CATGTGGAAG AAGATCCTCA ACTACGGATC GACGCTGCAG
CTGTTCCTCA CCGCGGTCGA CACCCCCGAT CCGCAGACTG CGATCTTCCG TTACGAGCGG
CCGATGCCGC TCAATTTGCT GCTGCGCGCG CTGCCGGACC TCGGTTACGT CTCGCCCAAG
CACATCTACG AGACCGGCGA CATCCGCCAG AACCCGGTCA ATCTCGCGCC GATCGGCACC
GGCCCGTTCA AGTTCAACAA ATACGAGCGC GGCCAGTACA TCATCGCCGA CCGCAACGAC
AATTACTGGC GGCCGAATGC GCCCTATCTC GACCGCATCG TCTGGCGGGT AATCACCGAC
CGCGCCGCGG CGGCGGCGCA GCTCGAAGCC GGCAGCCTGC ATCTCAGCCC GTTCTCGGGC
CTGACGATTT CCGACATGGC GCGGCTCGGC AAGGACAAGC GCTTCATCGT CTCGACCAAG
GGCAACGAGG GCAACGCCCG CACCAACACG CTGGAGTTCA ACTTCCGCCG CAAGGAGCTG
TCGGACATCC GCGTCCGCCA GGCGATCGCG CACGCGATCA ACGTGCCGTT CTTCATCGAG
AACTTCCTTG GCGACTTCGC CAGGCTCGGC ACCGGGCCGA TCCCCTCGAC CTCGGCCGAT
TTCTATCCCG GCCCGAACAC GCCGCAATAC GCTTACGACA AGAAGAAGGC GATCGCGCTG
CTCGACGAGG CCGGGCTGAA GCCCGCCGGC GGCGGCACCC GCCTCTCGCT GCGGCTGTTG
CCGGCGCCGT GGGGCGAGGA CATCTCGCTG TGGGCGACCT TCATCCAGCA ATCCCTGTCG
GAGATCGGCG TCCAGGTCGA GATCGTGCGC AACGATGGCG GCGGCTTCCT CAAGCAGGTC
TATGACGAAC ACGCCTTCGA CCTCGCCACC GGCTGGCACC AGTATCGCAA CGATCCCGCG
GTCTCGACCA CGGTGTGGTA TCGCTCCGGC CAGCCCAAGG GCGCGCCGTG GACTAATCAG
TGGGGCTGGG AAGACGCCAC CACCGACAAG ATCATCGATA ACGCCGCCAC CGAGGTCGAT
CCCGTCAAGC GCAAGGCGCT GTATGCCGAT TTCGTCACCC GCGCCAACAC CGAACTGCCG
ATCTGGATGC CGATCGAGCA ATTGTTCGTC ACGGTGATCT CCGCCAAGGC GCGCAATCAC
TCCAACAATC CGCGCTGGGC GTCATCGACC TGGCATGATC TTTGGCTGGC CGAATAG
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| Protein sequence | MALSRFEINR RTVLLTSAAI AANVLNPMRA FAQETPRKGG VFNVHYGAEQ RQLNPSLQAS
TGVYIIGGKI QEPLVDLDAA GNPVGVLAES WESTPDGKTI TFKLRKGVVW HDGKPFTSED
VAFTALNMWK KILNYGSTLQ LFLTAVDTPD PQTAIFRYER PMPLNLLLRA LPDLGYVSPK
HIYETGDIRQ NPVNLAPIGT GPFKFNKYER GQYIIADRND NYWRPNAPYL DRIVWRVITD
RAAAAAQLEA GSLHLSPFSG LTISDMARLG KDKRFIVSTK GNEGNARTNT LEFNFRRKEL
SDIRVRQAIA HAINVPFFIE NFLGDFARLG TGPIPSTSAD FYPGPNTPQY AYDKKKAIAL
LDEAGLKPAG GGTRLSLRLL PAPWGEDISL WATFIQQSLS EIGVQVEIVR NDGGGFLKQV
YDEHAFDLAT GWHQYRNDPA VSTTVWYRSG QPKGAPWTNQ WGWEDATTDK IIDNAATEVD
PVKRKALYAD FVTRANTELP IWMPIEQLFV TVISAKARNH SNNPRWASST WHDLWLAE
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