Gene RPD_1147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1147 
Symbol 
ID4021623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1304154 
End bp1305011 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content69% 
IMG OID637961339 
Producthypothetical protein 
Protein accessionYP_568286 
Protein GI91975627 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0434891 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCACTGC AATATGTCGT CGGAATCGAT CACGCCGTCA TCATGGTCAA GGATCTGGAT 
GCCGCCGCGG CCAATTGGCA ACGGCTCGGC TTCACGCTGT CGCCGCGCGG CACCCACAGC
GCCGCGCTCG GCTCCGGCAA TTACACCATC ATGTTCGGGC AGGACTACAT CGAGTTGCTC
GGCATCCTGA CCCCGACCGA GCACAACGCG CCGAGCCGCG CCTTCCTCGA CGAACGCGGT
GACGGCATCG AGCGGATCGC CTTCACCACC ACCGACGCCG CCAAGGGCGC CGACGAACTG
CGCGACCTCG GCCTCGCCGC GATCGGCCCG ATCGATTTCG GCCGGCCGGT GCAACTGCCG
GGCGGCGGCG AAGGCGAAGC ACGCTTCAGC ATCTTCCAAT GGCCGCTCAA TGAAGCGCCC
GCCGGCCTGC GCATTTTCGC ATGCCAGCAC CACACCCGCG ACACGGTGTG GATTCCCGAA
TTGCTGCGCC ACGCCAACAC CGCGGCCGGG CTGGTGCGGG TGATCATCAC CGCGCCGCGG
CCGGAGAGCG ATGCCCGGCA CATTCTGCGG CTGATCGACG GCGAGCAATA TTCCGAGCCC
GACGGCAGCG TTGTGGTGCC GTCCGGATCG GACCGCGCCG AATTCGCCTT CGTCGCGCGG
GACACGTTGG CGCAGCATTA TCCAGGCGTG TCGCTGGACG GCGTGCCGGA GCGCGGCGGC
GCCGGGCTGA TCATCGCGGT GACCGACCTC GCCGCGACCG CAAAGGCCGT CGGCGCTGCC
GGCGTCACGC TCGGCGACCG GCTGGTGGTG CCGCCGGGCG CGGCGAACGG CGTGCTGCTG
GTGTTCGTCC AACGCTGA
 
Protein sequence
MSLQYVVGID HAVIMVKDLD AAAANWQRLG FTLSPRGTHS AALGSGNYTI MFGQDYIELL 
GILTPTEHNA PSRAFLDERG DGIERIAFTT TDAAKGADEL RDLGLAAIGP IDFGRPVQLP
GGGEGEARFS IFQWPLNEAP AGLRIFACQH HTRDTVWIPE LLRHANTAAG LVRVIITAPR
PESDARHILR LIDGEQYSEP DGSVVVPSGS DRAEFAFVAR DTLAQHYPGV SLDGVPERGG
AGLIIAVTDL AATAKAVGAA GVTLGDRLVV PPGAANGVLL VFVQR