Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1147 |
Symbol | |
ID | 4021623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 1304154 |
End bp | 1305011 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637961339 |
Product | hypothetical protein |
Protein accession | YP_568286 |
Protein GI | 91975627 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0434891 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCACTGC AATATGTCGT CGGAATCGAT CACGCCGTCA TCATGGTCAA GGATCTGGAT GCCGCCGCGG CCAATTGGCA ACGGCTCGGC TTCACGCTGT CGCCGCGCGG CACCCACAGC GCCGCGCTCG GCTCCGGCAA TTACACCATC ATGTTCGGGC AGGACTACAT CGAGTTGCTC GGCATCCTGA CCCCGACCGA GCACAACGCG CCGAGCCGCG CCTTCCTCGA CGAACGCGGT GACGGCATCG AGCGGATCGC CTTCACCACC ACCGACGCCG CCAAGGGCGC CGACGAACTG CGCGACCTCG GCCTCGCCGC GATCGGCCCG ATCGATTTCG GCCGGCCGGT GCAACTGCCG GGCGGCGGCG AAGGCGAAGC ACGCTTCAGC ATCTTCCAAT GGCCGCTCAA TGAAGCGCCC GCCGGCCTGC GCATTTTCGC ATGCCAGCAC CACACCCGCG ACACGGTGTG GATTCCCGAA TTGCTGCGCC ACGCCAACAC CGCGGCCGGG CTGGTGCGGG TGATCATCAC CGCGCCGCGG CCGGAGAGCG ATGCCCGGCA CATTCTGCGG CTGATCGACG GCGAGCAATA TTCCGAGCCC GACGGCAGCG TTGTGGTGCC GTCCGGATCG GACCGCGCCG AATTCGCCTT CGTCGCGCGG GACACGTTGG CGCAGCATTA TCCAGGCGTG TCGCTGGACG GCGTGCCGGA GCGCGGCGGC GCCGGGCTGA TCATCGCGGT GACCGACCTC GCCGCGACCG CAAAGGCCGT CGGCGCTGCC GGCGTCACGC TCGGCGACCG GCTGGTGGTG CCGCCGGGCG CGGCGAACGG CGTGCTGCTG GTGTTCGTCC AACGCTGA
|
Protein sequence | MSLQYVVGID HAVIMVKDLD AAAANWQRLG FTLSPRGTHS AALGSGNYTI MFGQDYIELL GILTPTEHNA PSRAFLDERG DGIERIAFTT TDAAKGADEL RDLGLAAIGP IDFGRPVQLP GGGEGEARFS IFQWPLNEAP AGLRIFACQH HTRDTVWIPE LLRHANTAAG LVRVIITAPR PESDARHILR LIDGEQYSEP DGSVVVPSGS DRAEFAFVAR DTLAQHYPGV SLDGVPERGG AGLIIAVTDL AATAKAVGAA GVTLGDRLVV PPGAANGVLL VFVQR
|
| |