| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1142 |
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| Symbol | |
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| ID | 4021618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1297841 |
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| End bp | 1299598 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637961334 |
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| Product | ABC transporter related |
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| Protein accession | YP_568281 |
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| Protein GI | 91975622 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0499964 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTCTC TTTCAGGTTA TTCGCGGCGC CCGTTTGCCT TCATCTTGCG CTATTTGCGT
CAGCGTCCGG GCACGCATCT GGTCATTCTT GGATGCGTTC TGCTGGCGGT CGCGTGTTCG
GTGGGCACTC AGTACGGCGT GAAATATCTG GTCGATGGCC TCACGCGCGG GCAGTCGGGC
GTCGTCTGGC TCGGCTTCCT CTTCCTGATA TCGCTGATCG CCGCCGACAA TTTCCTCTGG
CGGATCGCCA GCTGGGTCGG GAGTTTCACC TTCGTCGGCG TCACCGCGGA TCTGCGGCGT
GACATGTTCC GGCATCTCAC CGGCCATGCG CCGAGCTATT TCTCCGATCG CCTGCCCGGG
ATGCTGTCGA GTCGCATCAC GGCGACTTCG AACGCGGTTT TCACCATCGA AAACATGTTC
GTCTGGAATG TGTTGCCGCC TTGCATCGCC ACCGTCCTGT CGATTGCCCT GATCGCGACG
GTCAGTGCGA AGATGGCGCT TGTGCTGGCG ATCGCCTCCG CCCTGCTGAT GGCGCTGGTG
TTCAAGCTGG CCGCGGACGG CAAACCCCTG CACGACGAAT TCGCCGACAA GGCCGCGACC
GTCGACGGCG AGATGGTGGA CGTGATCAAT AATATGCCGC TGGTCCGCGC TTTCTGCGGA
CTCGGATACG AGCACGCCCG GTTCGAGAAC ACCGTCAATC TCGAGGTCAA CGCCCGCGGT
CGCAGCCTGC GTTATCTCGA GCGGCTCCGG CTGTTACACG CCGTGATCAC GGTGATTCTC
ACCGTGGCGT TGCTCGCCTG GGCGATTCAG CTGTGGCAGC GCGGTGGCGC GTCGACCGGC
GATGTGGTGC TGATCTGCAC GTTGGGACTG TCGATCCTGC ACGCGACGCG CGATCTGGCG
GTGGCGCTGG TCGATGTCAC GCAGCACGTC GCCCGGCTGT CAGAGGCGAT CGCGACGCTG
CTCGTTCCCC ACGAACTCAG CGATCATCCC GAGGCCGAGC CGCTGGCGCG GGCAGGGGCG
GCGATCGCCT TTAACAATGT CTCCTTCAAT TATCCGGGCG GATCGAAAGT GTTCGATCGC
TTCACGCTGC GGCTCAATGC CGGCGAGCGC GTCGGATTAG TCGGCGCCTC GGGCGGCGGC
AAGTCAACGC TGTTCGTATT GCTGCAGCGG TTCTACGACG CGCAGAGCGG CAGCATCACC
ATCGACGGCC AGGACATTTC ACGCGTCACG CAGCACAGCC TGCGCGCCGC CATTTCGGTG
GTTCCGCAGG ACATTTCGCT GTTTCAGCGC TCGATCCGGG ACAACATCCG CTATGGCCGT
CCCGAGGCCA CCGACGAAGA GGTGCTGCGC GCGGCGATCG CGGCGCGCTG CGATTTCGTC
GAGAAGCTGC CCGAGGGACT CGACACCATG GTGGGCGATC GCGGCGTCAA GCTGTCCGGC
GGTCAGCGCC AGCGGCTCGC GATCGCGCGC GCGTTCCTGA AGGATGCGCC GATTCTGCTG
CTCGACGAAG CGACCGCTGC GCTCGATTCG GAATCGGAAG AAGCCATCCG CGAGGCATTG
GCGCGGCTGA TGCATGGGCG TACGGTGATC GCGATCGCCC ACCGTTTGGC GACGCTGCGC
AATTTCGACC GCGTGGTTCT GCTGCAATCC GGCCGGATTA TCGAAGATGG TCCGCCGGAT
CGGCTGATGC AGGGCCAGGG TCCGTACCGT GAACTGGTTG CGCGCGAGAT CAGCCGCCTG
GCGACGCATG TCGCCTGA
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| Protein sequence | MDSLSGYSRR PFAFILRYLR QRPGTHLVIL GCVLLAVACS VGTQYGVKYL VDGLTRGQSG
VVWLGFLFLI SLIAADNFLW RIASWVGSFT FVGVTADLRR DMFRHLTGHA PSYFSDRLPG
MLSSRITATS NAVFTIENMF VWNVLPPCIA TVLSIALIAT VSAKMALVLA IASALLMALV
FKLAADGKPL HDEFADKAAT VDGEMVDVIN NMPLVRAFCG LGYEHARFEN TVNLEVNARG
RSLRYLERLR LLHAVITVIL TVALLAWAIQ LWQRGGASTG DVVLICTLGL SILHATRDLA
VALVDVTQHV ARLSEAIATL LVPHELSDHP EAEPLARAGA AIAFNNVSFN YPGGSKVFDR
FTLRLNAGER VGLVGASGGG KSTLFVLLQR FYDAQSGSIT IDGQDISRVT QHSLRAAISV
VPQDISLFQR SIRDNIRYGR PEATDEEVLR AAIAARCDFV EKLPEGLDTM VGDRGVKLSG
GQRQRLAIAR AFLKDAPILL LDEATAALDS ESEEAIREAL ARLMHGRTVI AIAHRLATLR
NFDRVVLLQS GRIIEDGPPD RLMQGQGPYR ELVAREISRL ATHVA
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