| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1136 |
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| Symbol | |
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| ID | 4021612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1291840 |
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| End bp | 1293084 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637961328 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_568275 |
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| Protein GI | 91975616 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.206863 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCCATTA CCCGACGTTC GTTTGGAATC GGCGCGACTG GCCTGATGCT CGGCACGGTC
GCTGCTCCCT GGGTCCGCAA AGCCGGCGCA GCCCCTGCTC CGATCAGGAT CGGCGTGATC
AACTCGATGA GCGGCAGCCT GTCCGCCTAC GCGCAGGAAG GCCAGCCTGC GTTCGAGTAC
ATGATCAAGA AGATCAACGA TTCCGGCGGC ATCAAGAGCA AGGACGGCGC CAAGATCCAA
CTGATCCAGG CCGATGACAC CAGCCAGCCG GCCCGCACCG CGACCGAAGC GCGGCGGCTG
ATCACCGAAG AGAAGGTGCA TCTGCTGACC GGCACCATCC TCAGCGCGCA GATGCTGGCG
CTGACGCCGG TGCTGGACGA ATTGAAGGTG CCGACGCTGT CGATCTGGGC CGGCGGCGCA
CATTCGAACT ACATGTTCTC GCTGGGCTAC CCCTACGACC GCGGCTACGC CCAGACGATC
AACGATTTCA TCAAGTCGCT GCGCGACGAC GCCAAGTTCC CGGTCAAGAC CGCGGTGATG
AGCTACTCGA ACTACGAGGC CGGCCAGCAG GTCAACAAAT TCCTGCTGGA GAAGCTGAAG
GCCACCGGCA TCGAGGTGAT CGGCGAAGCG CCGCTCGACA CCAAGGCGCA GGATCAAACC
TCGGCGATGA TCCGCATCCG CTCGCTGAAG CCCGACATCG TCACCGGCCT GGTGACGCCG
CGCGACGGCA TTCTGCTGCA TCAGGCGCGC TACAATCTGA ACTATCACAA CAGCCTGTTC
ATCGGCGGCA CCGGCGGCTA TTCGGACCTG ACGCTGTGGA AGGACCTCGG GCCGGAGATC
GGCAAGGCGG TGCTGACCCG GAATCTGTTC GCGATGACCG GATTCAGCCC CGGCGCCAAG
ATCGATTCGA TGCAGAAGAT CGTCGCCGAA CTTCGCGACG TCGCCAAGCT CGACCGCATC
GGGCAGGGCG CCATCCAATA CGCGCAGGGC GCCCGCGTGC TGCAGCATGT GCTGGAGAAG
ACCGCGTCGC TCGAAAGCGA TGCGCTGCTG GCCGCGCTCA AGGCCTTCGA GATTCCGGCC
GGCCATCCCG ATCTCTACAT CGCCAAGCCG AAGGGACTGC AATTCGCCGA CGATCGCCTG
CCGAAGGACG GCTCCGCGAT GATGGTGCAG TGGATGCCGG ATCAGGCGCA GGAGGTGGTG
TTCCCGAAGG AGTTCGCGCA GTCCGCTCCG CGTCCGAAGA GCTGA
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| Protein sequence | MSITRRSFGI GATGLMLGTV AAPWVRKAGA APAPIRIGVI NSMSGSLSAY AQEGQPAFEY
MIKKINDSGG IKSKDGAKIQ LIQADDTSQP ARTATEARRL ITEEKVHLLT GTILSAQMLA
LTPVLDELKV PTLSIWAGGA HSNYMFSLGY PYDRGYAQTI NDFIKSLRDD AKFPVKTAVM
SYSNYEAGQQ VNKFLLEKLK ATGIEVIGEA PLDTKAQDQT SAMIRIRSLK PDIVTGLVTP
RDGILLHQAR YNLNYHNSLF IGGTGGYSDL TLWKDLGPEI GKAVLTRNLF AMTGFSPGAK
IDSMQKIVAE LRDVAKLDRI GQGAIQYAQG ARVLQHVLEK TASLESDALL AALKAFEIPA
GHPDLYIAKP KGLQFADDRL PKDGSAMMVQ WMPDQAQEVV FPKEFAQSAP RPKS
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