Gene RPD_1132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1132 
Symbol 
ID4021608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1287132 
End bp1287926 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content69% 
IMG OID637961324 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_568271 
Protein GI91975612 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.654953 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.988887 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCCG AGACCGCGCC TGACGACGCC GTCGTGTTCG AACGCCATCA CGACGTGATG 
GTCGTCCGCC TCAGCAGCCC TGCGACACGC AATGCGCTGC AGCCCGCGGT CAAGCAGCAC
CTCGAATCCC GTATTCCGGA ATTACTGACC GACCCGTCGG TGCGGTGTCT CGTGATCACC
GGCTCGGGCC AGTCGTTCTG CGCCGGCGGC GACATCAACA ACATGGGCGA GCGCGACGCG
CCGCGCGTGC GGCGGCGGAT GCAGGCGACG CATTCCTGGG CGCAGCGGCT GCTGACGGCG
GAGAAGCCGG TGATCGCGGC GGTCAACGGC TCCGCGGCGG GCGCGGGATT CTCGCTGGCG
CTGCTGTGCG ACATCGTGCT GGTGTCCGAC CAGGCTTACT TCCGCGCCGC GTTTCCCGGC
CTCGGCGCCG CGCCGGATCT CGGCCTGGCG CTGACCTTGC CGCGCGCGAT CGGCGCATCG
CGTGCCAAGG ACATTCTGCT CACCAACCGG CGCGTCGAGC CCGACGAGGC GCAAGCGCTC
GGCATCGCCA AGCGCGTCGT GCCCGGCGAT CAACTGCTCG GCGAGGCGCT CGAACTCGCG
GCGGAACTCG CCGCAGGGCC CGCCACCTCG CTCGGCCTGA CCAAGATGCT GGTCAACGGC
GCGTTCGGAC CGATCGAGGA ATTCTTCGCG CTGGAAGCGT TCGCTCAGGC CGTGGCGTTC
GGCAGCGATG AATTCGCCGA GGGCGTCGAG GCGTTCCGCG CCAAGCGCAA ACCGGATTTC
AACAAGCGCG GCTGA
 
Protein sequence
MQAETAPDDA VVFERHHDVM VVRLSSPATR NALQPAVKQH LESRIPELLT DPSVRCLVIT 
GSGQSFCAGG DINNMGERDA PRVRRRMQAT HSWAQRLLTA EKPVIAAVNG SAAGAGFSLA
LLCDIVLVSD QAYFRAAFPG LGAAPDLGLA LTLPRAIGAS RAKDILLTNR RVEPDEAQAL
GIAKRVVPGD QLLGEALELA AELAAGPATS LGLTKMLVNG AFGPIEEFFA LEAFAQAVAF
GSDEFAEGVE AFRAKRKPDF NKRG