| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1117 |
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| Symbol | |
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| ID | 4021593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1271529 |
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| End bp | 1272494 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637961309 |
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| Product | PDZ/DHR/GLGF |
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| Protein accession | YP_568256 |
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| Protein GI | 91975597 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0129707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTCCT TGCCCGAATG GAATGTGCCG GCCGCGATCC GGCCGCGTGC CGCTGACTTT
CCGTTCGATC TCGAACGCGC GTTGTCGTCG GTGATCGGGT TGCATTCGAT CATTCCGTCG
GACGCCTTCA CGGCGAACAC GCTCGGCACC GAGCGCGCCG GCAATTGCGT GCTGATCGAC
GACGGCCTGC TGCTGACCAT CGGCTATCTG ATCACCGAGG CGGAGACGGT CTGGCTTCAT
CTCGGCGACG GGCGGGTGGT CGAGGGCCAT GCGCTCGGCT TCGATGCGGA GAGCGGGTTC
GGTCTCGTGC AGGCGCTCGG CCCGATCGAT CTGCCGCCGC TGGCGCTCGG CAATTCCGGT
GCGGCCAAAG CCGGCGATCG CGTGGTGATC GCCGGCGCCG GCGGACGAAC GCGATCGGTC
GCGGGTCGGA TCGCCACAAG GCAGGAATTC GCCGGCTATT GGGAATATCT GCTCGACGAC
GCGATCTTCA CCGAACCGTC GCACCCGAAT TGGGGCGGCG CCGGGCTGAT TTCGGCGACG
GGCGAACTCA TCGGCATCGG CTCGCTGCAG ATCGAGCGCA GCGGCACCGA CGCGCATTAC
AACATGATCG TGCCGATCGA TCTGTTGAAG CCGGCGCTCT CCGATCTGCG CAAATTCGGT
CGCGTCGACA AGCCGCCGCG GCCGTGGCTC GGCCTGTATT CGACCGAGAT CGAGGGCAAG
ATCGTCGTGG TCGGAATCGC GCCGAAGGGC CCGGCCGCCC GCGCCGAACT GAAGTCCGGC
GACGTCATCC TCGCGGTCGC CGGCGAGAAG GTCAGCAGCG AGGGCGAGTT CTATCGCAAG
ATCTGGGCGC TCGGCACCGC GGGCGTCGAG GTCCCGCTGA CGCTGTTCAG CGGCGGCGCG
ACCTTCGACG TCGTGCTGCA CTCATCCGAC CGCGCCAAAT TCCTCAAGGC CCCGCGGCTG
CACTGA
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| Protein sequence | MPSLPEWNVP AAIRPRAADF PFDLERALSS VIGLHSIIPS DAFTANTLGT ERAGNCVLID
DGLLLTIGYL ITEAETVWLH LGDGRVVEGH ALGFDAESGF GLVQALGPID LPPLALGNSG
AAKAGDRVVI AGAGGRTRSV AGRIATRQEF AGYWEYLLDD AIFTEPSHPN WGGAGLISAT
GELIGIGSLQ IERSGTDAHY NMIVPIDLLK PALSDLRKFG RVDKPPRPWL GLYSTEIEGK
IVVVGIAPKG PAARAELKSG DVILAVAGEK VSSEGEFYRK IWALGTAGVE VPLTLFSGGA
TFDVVLHSSD RAKFLKAPRL H
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