| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1098 |
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| Symbol | |
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| ID | 4021574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1246834 |
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| End bp | 1248216 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637961290 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_568237 |
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| Protein GI | 91975578 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCCGC GTGAGATTGT TGCGCTGCGC AACTATCTCG CAGCCGGCCT GAGCGACCGC
ACGCTCTCCG ACGGGACCGA CACCCTCGCG ATCGGCGAGA TCGCGTACGC CACCGCGCTC
AGCGGCCGGC TGACCGAACT CGCAGGCCGA TCCGTGGTGT TGTCGCTGTC GACGCAGCTG
ATCAGCGGCG TCGCGATGAT CGAGATCGAC GGCGTCGCGC GGCAGATGCT GCTGTGTCCG
CCCGATTTCG ACATGAAATA CGCCCCGACG CTGATCGCCG ACGCGCAGAT CGACGCGATC
GTCACCGACG ATCCGGCGCG CTGGCAGGGG CTCGGCGTCG ACCTGATCGT GCCGGCACGC
CTCCCGCTGC AACCCGCTGC GCCGGTCGAC CGGTTACATA CGACACACTG GCTGATGCTC
ACCTCCGGCA CCACCGGCGC GCCGAAAATC GTGGCGCATA CGCTGGCGGC GCTGACCGGC
GCGATCGTGG CGGATGGACC GGCGAAAGGC GCGCCACCGA CCTGGGCGAC GTTCTACGAC
ATCCGCCGCT ACGGCGGACT ACAGATCTTC CTCCGCGCCA TCCTGGGCGG CGGATCGATC
GTGCTCTCCA CGCCGGGCGA GTCGATCGCC GATCATCTGG CGCGGCTCGC TTCGCGCCGT
GTCACCCATA TCTCGGGCAC GCCGTCGCAT TGGCGCAAGG CGCTGATGAG CGCCGCACTC
TCGACGTTCC GGCCGAACTA CGTTCGGCTG TCCGGCGAGA TCGCCGATCA GGCCGTGCTC
GACAGTCTGC GCCGCGCGTT TCCCGAGGCC TCGATCGGCC ATGCCTATGC GTCCACCGAG
GCGGGCGTCG GTTTCGCTGT GAATGATGGC CGCGAGGGCT TCCCCGCGGC GATGATCGGC
GTCAACGCCA ACGGCGTCGA CATGAAAGTG ATCGACGGCT CGCTGCGGAT TCGATCCGGC
CGCACCGCCC ACACCTATGT GGGGCGCAGC GCGCCGCAAT TGACCGACGC GGACGGCTTC
GTCGATACCG GCGACATGGT GGAGCTTCGC GACGATCGCT ATTACTTCGT CGGCCGCCGC
GACGGCATCA TCAATGTCGG GGGCCTCAAA GTGCATCCGG AAGAAGTCGA AGCCGTGATC
AATCGCCACC CGGCGGTGCG GATGTCGCGA ATTCGCTCGC GGCGCAGCCC GATCACCGGC
GCGCTGGTGG TCGCCGACGT GGTGCTGGCG AGCGTCTCCG ACGCCGGTCG TACCGCGGAG
ATCCGCGAGG CGATCCTCGC CGACTGCAAG CAGTCTCTGC CGCCGCACAA GCTGCCGGTC
ATGATCAGTT TCGTCGAAAA GCTCGATGTC ACCGCCTCCG GAAAGCTGGC CCGCCATGCG
TAA
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| Protein sequence | MSPREIVALR NYLAAGLSDR TLSDGTDTLA IGEIAYATAL SGRLTELAGR SVVLSLSTQL
ISGVAMIEID GVARQMLLCP PDFDMKYAPT LIADAQIDAI VTDDPARWQG LGVDLIVPAR
LPLQPAAPVD RLHTTHWLML TSGTTGAPKI VAHTLAALTG AIVADGPAKG APPTWATFYD
IRRYGGLQIF LRAILGGGSI VLSTPGESIA DHLARLASRR VTHISGTPSH WRKALMSAAL
STFRPNYVRL SGEIADQAVL DSLRRAFPEA SIGHAYASTE AGVGFAVNDG REGFPAAMIG
VNANGVDMKV IDGSLRIRSG RTAHTYVGRS APQLTDADGF VDTGDMVELR DDRYYFVGRR
DGIINVGGLK VHPEEVEAVI NRHPAVRMSR IRSRRSPITG ALVVADVVLA SVSDAGRTAE
IREAILADCK QSLPPHKLPV MISFVEKLDV TASGKLARHA
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