Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1096 |
Symbol | |
ID | 4021572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1245095 |
End bp | 1246033 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637961288 |
Product | hypothetical protein |
Protein accession | YP_568235 |
Protein GI | 91975576 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0172] Seryl-tRNA synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGTTG CGATCCGCAA TGTCCCGTCC GAGACCCACG CTCAACCGAT CGATCCGCTC GATCACCTCG CCGAGCATCT GTTTCACCGT CTCGGCGCCG ATGGCGTCTA TGCCCGGACC GCGTTGTACG AGGGGGTGGT CGAGAAGCTC GCGGCGCTGA TCTCGAGTCA TCGCGAAGCC GGCACCGAGG TGATGCGTTT CCCTCCGGTG ATGAGCCGCA GTCAGCTGGA GAAGTCGGGT TATCTGAAGA GCTTCCCGAA CTTGCTGGGT TGCGTTTGTG GGCTTCACGG CACCGAGCAG GAGATCAATT CGGCGGTCAG CCGGTTCGAT GCCGGCGGCG ACTGGACGAC ATCGTTGTCG CCGGCCGATC TCGTGCTGTC GCCCGCGGCC TGTTACCCGG TGTATCCGAT CGCCGCGAGC CGCGGGCCGC TGCCCGTGGG CGGCCTTCGT TTCGACGTCG CCGCCGATTG CTTCCGCCGC GAACCGTCCA AGCAGCTCGA TCGGCTGCAG TCGTTCCGGA TGCGCGAATA TGTCTGCATC GGCACGCCGC AGGACGTCGC CGAGTTCCGC GAACGCTGGA TGGTGAAGGC CCAGGCGATC GCGCATGATC TCGGTCTCGC GTTCAAGGTC GATCACGCGT CCGATCCGTT CTTCGGCCGG GTCGGCCAGA TGAAGGCGAT CAGCCAGGTT CAGCAGGCGC TGAAATTCGA ATTGCTGGTG CCGCTGCGTT CGGAAGAGCA GCCGACCGCG TGTATGAGCT TCAATTATCA CCGTGAGCAT TTCGGCGTGA CCTGGGCCAT CGACGATGCC GAAGGCAAAC CCGCCCACAC CGGCTGCGTC GCCTTCGGCA TGGACCGGCT GGCGGTGGCG CTGTTCCACA CCCACGGTAT CGACCTGGCT GCCTGGCCGG CGAGCGTGCG CGAGATGTTG GGGCTGTAA
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Protein sequence | MNVAIRNVPS ETHAQPIDPL DHLAEHLFHR LGADGVYART ALYEGVVEKL AALISSHREA GTEVMRFPPV MSRSQLEKSG YLKSFPNLLG CVCGLHGTEQ EINSAVSRFD AGGDWTTSLS PADLVLSPAA CYPVYPIAAS RGPLPVGGLR FDVAADCFRR EPSKQLDRLQ SFRMREYVCI GTPQDVAEFR ERWMVKAQAI AHDLGLAFKV DHASDPFFGR VGQMKAISQV QQALKFELLV PLRSEEQPTA CMSFNYHREH FGVTWAIDDA EGKPAHTGCV AFGMDRLAVA LFHTHGIDLA AWPASVREML GL
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