Gene RPD_1096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1096 
Symbol 
ID4021572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1245095 
End bp1246033 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content64% 
IMG OID637961288 
Producthypothetical protein 
Protein accessionYP_568235 
Protein GI91975576 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0172] Seryl-tRNA synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTTG CGATCCGCAA TGTCCCGTCC GAGACCCACG CTCAACCGAT CGATCCGCTC 
GATCACCTCG CCGAGCATCT GTTTCACCGT CTCGGCGCCG ATGGCGTCTA TGCCCGGACC
GCGTTGTACG AGGGGGTGGT CGAGAAGCTC GCGGCGCTGA TCTCGAGTCA TCGCGAAGCC
GGCACCGAGG TGATGCGTTT CCCTCCGGTG ATGAGCCGCA GTCAGCTGGA GAAGTCGGGT
TATCTGAAGA GCTTCCCGAA CTTGCTGGGT TGCGTTTGTG GGCTTCACGG CACCGAGCAG
GAGATCAATT CGGCGGTCAG CCGGTTCGAT GCCGGCGGCG ACTGGACGAC ATCGTTGTCG
CCGGCCGATC TCGTGCTGTC GCCCGCGGCC TGTTACCCGG TGTATCCGAT CGCCGCGAGC
CGCGGGCCGC TGCCCGTGGG CGGCCTTCGT TTCGACGTCG CCGCCGATTG CTTCCGCCGC
GAACCGTCCA AGCAGCTCGA TCGGCTGCAG TCGTTCCGGA TGCGCGAATA TGTCTGCATC
GGCACGCCGC AGGACGTCGC CGAGTTCCGC GAACGCTGGA TGGTGAAGGC CCAGGCGATC
GCGCATGATC TCGGTCTCGC GTTCAAGGTC GATCACGCGT CCGATCCGTT CTTCGGCCGG
GTCGGCCAGA TGAAGGCGAT CAGCCAGGTT CAGCAGGCGC TGAAATTCGA ATTGCTGGTG
CCGCTGCGTT CGGAAGAGCA GCCGACCGCG TGTATGAGCT TCAATTATCA CCGTGAGCAT
TTCGGCGTGA CCTGGGCCAT CGACGATGCC GAAGGCAAAC CCGCCCACAC CGGCTGCGTC
GCCTTCGGCA TGGACCGGCT GGCGGTGGCG CTGTTCCACA CCCACGGTAT CGACCTGGCT
GCCTGGCCGG CGAGCGTGCG CGAGATGTTG GGGCTGTAA
 
Protein sequence
MNVAIRNVPS ETHAQPIDPL DHLAEHLFHR LGADGVYART ALYEGVVEKL AALISSHREA 
GTEVMRFPPV MSRSQLEKSG YLKSFPNLLG CVCGLHGTEQ EINSAVSRFD AGGDWTTSLS
PADLVLSPAA CYPVYPIAAS RGPLPVGGLR FDVAADCFRR EPSKQLDRLQ SFRMREYVCI
GTPQDVAEFR ERWMVKAQAI AHDLGLAFKV DHASDPFFGR VGQMKAISQV QQALKFELLV
PLRSEEQPTA CMSFNYHREH FGVTWAIDDA EGKPAHTGCV AFGMDRLAVA LFHTHGIDLA
AWPASVREML GL