Gene RPD_1073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1073 
SymbolnifH 
ID4021549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1224040 
End bp1224939 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content64% 
IMG OID637961265 
Productnitrogenase reductase 
Protein accessionYP_568212 
Protein GI91975553 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1348] Nitrogenase subunit NifH (ATPase) 
TIGRFAM ID[TIGR01287] nitrogenase iron protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCAC TTCGGCAAAT CGCATTTTAC GGCAAGGGCG GCATCGGCAA GTCGACCACC 
TCGCAGAACA CCCTCGCGGC GCTGGTCGAG CTGGGTCAGA AGATCCTGAT CGTCGGCTGC
GACCCCAAGG CGGACTCCAC CCGCCTGATC CTCAACACCA AGATGCAGGA CACCGTGCTC
AGCCTCGCTG CTGAAGCGGG TTCGGTCGAG GATCTCGAAC TCGAAGACGT GATGAAGATC
GGCTACAAGG GCATCAAGTG CACCGAAGCC GGTGGTCCCG AGCCGGGCGT CGGCTGCGCC
GGCCGCGGCG TCATCACCGC GATCAACTTC CTCGAAGAGA ACGGCGCCTA TGAAGACGTC
GACTACGTCT CCTATGACGT GCTCGGGGAC GTGGTCTGCG GCGGCTTCGC GATGCCGATC
CGCGAGAACA AGGCCCAGGA AATCTACATC GTGATGTCCG GCGAGATGAT GGCGCTGTAT
GCCGCCAACA ACATCGCCAA GGGCATTCTG AAATACGCCT CCTCGGGCGG CGTCCGCCTC
GGCGGCCTGA TCTGCAACGA GCGCCAGACC GACCGCGAGC TCGACCTCGC CGAAGCGCTG
GCTGCCCGGC TGAACTCCAA GCTGATCCAC TTCGTGCCGC GCGCCAACAT CGTGCAGCAT
GCCGAGCTGC GCCGCCAGAC CGTGATCGAA TACGCGCCCG ACTCCCAGCA GGCGCAGGAA
TATCGGCAGC TCGCCAACAA GATCCACGCC AATTCCGGCA ACGGCACCAT CCCGACCCCG
ATCACCATGG AAGAGCTGGA AGGCATGCTG CTCGACTTCG GCATCATGAA GACCGACGAG
CAGGCGCTCG CCGAACTCGC CGAGAAGGAA GCCGCCAAGG CGGCGGCCGC CACCGCTTGA
 
Protein sequence
MAALRQIAFY GKGGIGKSTT SQNTLAALVE LGQKILIVGC DPKADSTRLI LNTKMQDTVL 
SLAAEAGSVE DLELEDVMKI GYKGIKCTEA GGPEPGVGCA GRGVITAINF LEENGAYEDV
DYVSYDVLGD VVCGGFAMPI RENKAQEIYI VMSGEMMALY AANNIAKGIL KYASSGGVRL
GGLICNERQT DRELDLAEAL AARLNSKLIH FVPRANIVQH AELRRQTVIE YAPDSQQAQE
YRQLANKIHA NSGNGTIPTP ITMEELEGML LDFGIMKTDE QALAELAEKE AAKAAAATA