Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1034 |
Symbol | |
ID | 4021510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1185127 |
End bp | 1186206 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637961226 |
Product | spermidine/putrescine ABC transporter ATP-binding subunit |
Protein accession | YP_568173 |
Protein GI | 91975514 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.330861 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAACA TCAGAACCAA CGGCGCTGCA CTTGTCCTGA AAGATCTCGC GAAGACCTAC GGTTCGCTCG CCGTGGTCCG GGATGTGTCG CTCACCGTCG CGCCGGGCGA GTTCGTCACC TTTCTCGGGC CGAGCGGTTC GGGCAAGACG ACGACGCTCA ATCTCATCGC CGGATTCACT GAGGCCAGCG CCGGCCGGAT CACGCTCGAC GGACGCGATC TCGGCAATGT GCCGGCGCAT CAGCGTGGCA TCGGCGTCGT GTTCCAGAGC TACGCGCTGT TCCCGCATAT GACGGTGCGG CAGAACATCG CCTATCCGCT CGAACAGCGC CGACCGCGGA TGGACCGCAA GGCGATCGAG ACGCAGGTCG GCGACGTCCT GCAATTGGTC GAGATGGCCG GATACGCCGA CCGCCGGCCG CATCAATTGT CCGGCGGCCA GCAGCAGCGC GTCGCGCTCG CGCGTGCGGT GGTGTTCGAA CCGAAACTGC TGTTGCTCGA CGAGCCGCTC GGCGCGCTCG ACAAGAGGTT GCGGGAAAGC CTGCAGCTCG AGCTGCGCCG CATCCACCGT GAGCTGGGCG TCACCGTCAT CTTCGTCACC CACGACCAGG ACGAGGCGAT GACGCTGTCG GATCGCATCG TGGTGTTCAA CGAGGGCCGC ATCGAGCAGG TCGGCACGCC GCAGCAGCTG TACGGGCAGC CGGCCACCGA GTTCGTCGCC CGCTTTCTCG GCGACTCGAA CATCTTCCGC GGCCGGGTCG AGGACCAGCA TCTGAATTGT GGCGCGTTCA ACATCCGGCT GCCCGCGCCG GCCACGCCCG GTCCGCTGTC CGCGATGGTG CGCCCGGAAA AAATGCGGGT GAAGAAGGAC GTCGCCGGCG CAGGCGAGGA CGGCGTTGCC GCCACGCTCA CCGACGTGAC GTTCTCGGGC TCGACCTGGC GGGTCGAGGG GCATGATTCG GATGGCCGGA CCTTGTTGGC GCGGGTCGCC GACGGTTCGA CCCTCCACAT CGGCGAGATG GTCAATTTCG TCTGGTCCGT CGAGGACGTC CGTATCGTCG CCAGCGAAGC CCGGCCATGA
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Protein sequence | MTNIRTNGAA LVLKDLAKTY GSLAVVRDVS LTVAPGEFVT FLGPSGSGKT TTLNLIAGFT EASAGRITLD GRDLGNVPAH QRGIGVVFQS YALFPHMTVR QNIAYPLEQR RPRMDRKAIE TQVGDVLQLV EMAGYADRRP HQLSGGQQQR VALARAVVFE PKLLLLDEPL GALDKRLRES LQLELRRIHR ELGVTVIFVT HDQDEAMTLS DRIVVFNEGR IEQVGTPQQL YGQPATEFVA RFLGDSNIFR GRVEDQHLNC GAFNIRLPAP ATPGPLSAMV RPEKMRVKKD VAGAGEDGVA ATLTDVTFSG STWRVEGHDS DGRTLLARVA DGSTLHIGEM VNFVWSVEDV RIVASEARP
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